| Protein: | APG_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 505 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for APG_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
162.0 | [0..2] | [403..103] |
|
|
137.0 | [0..9] | [505..27] |
|
|
132.0 | [0..3] | [500..871] |
|
|
130.0 | [0..5] | [505..1378] |
|
|
124.0 | [0..7] | [503..68] |
|
|
123.0 | [0..5] | [504..85] |
|
Region A: Residues: [1-139] |
1 11 21 31 41 51
| | | | | |
1 MLRGNDTGSD LAELLWDNGA PAPLRPPPPP PFQPFTCSAA ATTSPPAHDY LFIKNLMRGG 60
61 GAANHHHHDD DDDDDDDVPW LHYHPVVDDD DDADADTAPL PPDYCAALLS GLSDHLPPPA 120
121 AAASRVDPDP CSSSHGAVV
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [140-329] |
1 11 21 31 41 51
| | | | | |
1 PSTSAAAAKQ ARTSGGGGGG VMNFTFFSRP LQQRPSGGET ASASASAAAT STVPVESTVV 60
61 QAATNRLRST PLFSDQRMAW LHPPKPSPRA AAPPPPPPLA PTTRHRLDTA AATATVAQRL 120
121 PPSEARAPDA PPPAATATAT TSSVCSGNGD RRQLNWRDSH NNQSAEWSAS QDELDLDDEL 180
181 AGVHRRSAAR
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [330-420] |
1 11 21 31 41 51
| | | | | |
1 SSKRSRTAEV HNLSERRRRD RINEKMRALQ ELIPNCNKID KASMLEEAIE YLKTLQLQVQ 60
61 MMSMGTGMFV PPMMLPAAAA AMQHHHMQMQ Q
|
| Detection Method: | |
| Confidence: | 8.154902 |
| Match: | 1nkpA |
| Description: | Myc prot-oncogene protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [421-505] |
1 11 21 31 41 51
| | | | | |
1 MAGPMAAAAH FPHLGAAAAM GLAGFGMPAA AQFPCPMFPA APPMSMFAPP PPPPPFPHAA 60
61 ATAVEQTPSP PGAADAGNAP AVKQA
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
