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View Structure Prediction Details

Protein: SMR1_ARATH
Organism: Arabidopsis thaliana
Length: 128 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SMR1_ARATH.

Description E-value Query
Range
Subject
Range
gi|26451684 - gi|26451684|dbj|BAC42937.1| unknown protein [Arabidopsis thaliana]
186.0 [0..1] [128..1]

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Predicted Domain #1
Region A:
Residues: [1-128]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLELLQDLS KFNFPTPIKI RSKTSKTKKD EGDDDEDDLR CSTPTSQEHK IPAVVDSPPP  60
   61 PPRKPRPPPS APSATAALMI RSCKRKLLVS TCEIIMNREE IDRFFSSVYN ETSTTAKRRR 120
  121 SYPYCSRR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.290 a.24.19 Description not found.
View Download 0.278 f.56.1 Description not found.
View Download 0.264 a.152.1 Antioxidant defence protein AhpD
View Download 0.260 d.20.1 UBC-like
View Download 0.254 a.24.22 Description not found.
View Download 0.224 d.58.20 NAD-binding domain of HMG-CoA reductase


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle