YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MOR1_ARATH
Organism: Arabidopsis thaliana
Length: 1978 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for MOR1_ARATH.

Predicted Domain #1
Region A:
Residues: [1-1137]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTEDEKLLK EAKKLPWEDR LGHKNWKVRN EANVDLASVF DSITDPKDPR LRDFGHLFRK  60
   61 TVADSNAPVQ EKALDALIAF LRAADSDAGR YAKEVCDAIA LKCLTGRKNT VDKAQAAFLL 120
  121 WVELEAVDVF LDTMEKAIKN KVAKAVVPAV DVMFQALSEF GSKVIPPKRI LKMLPELFDH 180
  181 QDQNVRASAK GVTLELCRWI GKDPVKSILF EKMRDTMKKE LEAELANVTA GAKPTRKIRS 240
  241 EQDKEPEAEA SSDVVGDGPS EEAVADAPQE IDEYDLMDPV DILTPLEKSG FWDGVKATKW 300
  301 SERKEAVAEL TKLASTKKIA PGDFSEICRT LKKLITDVNL AVAVEAIQAI GNLACGLRTH 360
  361 FSASSRFMLP VLLEKLKEKK QSVTDPLTQT LQTMYKAGCL NLVDVIEDVK TAVKNKVPLV 420
  421 RSSTLTWLTF CLETSNKALI LKAHKEYVPL CMECLNDGTP DVRDAAFSAL AAIAKSVGMR 480
  481 PLERSLEKLD DVRKKKLSEM IAGSGGGDQA GTSSVTVQSS VGSTATGNSD ASFVRKSAAS 540
  541 MLSGKRPAPS AQASKKVGTG KPGGGKKDGS VRNEGSKSVE PPEDVEPAEM GLEEIENRLG 600
  601 SLVKPETVSQ LKSSVWKERL EATLALKEEI EGLQELDKSV EILVRLLCAV PGWNEKNVQV 660
  661 QQQVIEIITY ISSTAAKFPK KCVVLCITGT SERVADIKTR ASAMKCLTAF CEAVGPGFVF 720
  721 ERLFKIMKEH KNPKVLSEGL LWMVSAVDDF GVSLLKLKDL IDFCKDVGLQ SSTAATRNAT 780
  781 IKLLGALHKF VGPDIKGFLN DVKPALLSAL DTEYEKNPFE GTAAPKRVVK TSVSTSTSSG 840
  841 GLDSLPREDI STKITPNLLK GFESPDWKMR LESIEAVNKI LEEANKRIQP TGTGELFGGL 900
  901 RGRLLDSNKN LVMQTLTTIG GVAAAMGPAV EKASKGILSD VLKCLGDNKK HMRECTLAAL 960
  961 DLWLGAVHLD KMIPYIIIAL TDGKMGAEGR KDLFDWLTKQ LTGLSDFVDA IHLLKPASTA1020
 1021 MTDKSADVRK AAEGCISEIL RVSGQEMIEK NLKDIQGPAL ALVLEKVRPG FVQEPFESSK1080
 1081 AMAGPVSKGV TKISKSTSNG TLKQGNRSRA VPTKGSSQIT SVHDIAIQSQ ALLNTKD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 88.30103
Match: 1u6gC
Description: Crystal Structure of The Cand1-Cul1-Roc1 Complex
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [1138-1394]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNKEDRERVV VRRIKFEELR PEQIQDLEND MMKFFREDLQ KRLLSPDFKK QVDGLEILQK  60
   61 ALPSVSKEII EVLDVLLRWF VLQFCKSNTT CLLKVLEFLP ELFNTLRDEE YCMTEAEAAI 120
  121 FLPCLAEKLG HNIEKVREKM RELMKQIIQA YSVGKTYPYI LEGLRSKNNR TRIECTDLIG 180
  181 YLLETCGTEI GGLLKYLNIV ASLTAERDGE LRKAALNTMA TGYQILGADI WKYVGKLTDA 240
  241 QKSMIDDRFK WKAKDME

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.045757
Match: 2of3A
Description: No description for 2of3A was found.

Predicted Domain #3
Region A:
Residues: [1395-1440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KRREGKPGEA RAALRRSVRD SGPEVAEQSG DISQTVPGPL FPRQSY

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [1441-1556]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GISEQMLERT PVPRTIAGVN GPTDWNEALD IIMFGSPEQS VEGMKVVCHE LAQASNDPEE  60
   61 SAIDELVKDA DGLVSCLANK VAKTFDVSLM GASSRSCKYV LNTLMQTFQN KKLAHA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [1557-1742]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VKEGTLESLI TELLLWLLDE RVPRMEDGSQ LLKALNVLML KILDNADRTS SFVVLISLLR  60
   61 PLDPSRWPSP ATAEVYAVRN QKFSDLVVKC LIKLTKLLQS TIYEVDLDRL LQSIHVYLQD 120
  121 LGMEEIRRRA GADDKPLRMV KTVLHELVKL RGAAIKGHLS LVPIDMRPQP IILAYIDLNL 180
  181 ETLAAA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [1743-1837]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RMLTATGPVG QTHWTDSTAN NPSPPANSAD VQLKQELGAI FKKIGDKQTS TIGLYDLYHI  60
   61 TKSYPKVDIF SQLQNASEAF RTYIRDGLAQ VEKNA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1838-1978]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AAGRTPSSLP LSTPPPSSLA LPSPDIPSLS SLDVKPLMNP RSDLYTDDIR ASNMNPGVMT  60
   61 GTLDAIRERM KNMQLASSEP VSKPLMPTND NLSMNQQSVP PSQMGQETVH THPVVLPMDE 120
  121 KALSGLQARM ERLKGGSLEH M

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle