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View Structure Prediction Details

Protein: ERG16_ARATH
Organism: Arabidopsis thaliana
Length: 525 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERG16_ARATH.

Description E-value Query
Range
Subject
Range
gi|27475612 - gi|27475612|emb|CAD23249.1| squalene monooxygenase 1 [Medicago truncatula]
323.0 [0..12] [517..9]

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Predicted Domain #1
Region A:
Residues: [1-525]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPTIFVDHC ILTTTFVASL FAFLLLYVLR RRSKTIHGSV NVRNGTLTVK SGTDVDIIIV  60
   61 GAGVAGAALA HTLGKEGRRV HVIERDLTEP DRIVGELLQP GGYLKLIELG LEDCVKDIDA 120
  121 QRVLGYALFK DGKHTKLSYP LDQFDSDVAG RSFHNGRFVQ RMREKASLLP NVRMEQGTVT 180
  181 SLVEENGIIK GVQYKTKDGQ ELKSFAPLTI VCDGCFSNLR RSLCKPKVEV PSNFVGLVLE 240
  241 NCELPFPNHG HVVLGDPSPI LFYPISSSEV RCLVDVPGSK LPSVASGEMA HHLKTMVAPQ 300
  301 VPPQIRDAFI SAVEKGNIRT MPNRSMPADP IHTPGALLLG DAFNMRHPLT GGGMTVALSD 360
  361 IVILRDLLNP LVDLTNKESL SKYIESFYTL RKPVASTINT LAGALYKVFL ASPDDARSEM 420
  421 RRACFDYLSL GGVCSSGPVA LLSGLNPRPM SLVLHFFAVA IFGVGRLLVP LPSVKRLWLG 480
  481 ARLISSASGI IFPIIKAEGV RQMFFPRTIP AIYRAPPTPS SSSPQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.30103
Match: 2dkhA
Description: No description for 2dkhA was found.

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