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View Structure Prediction Details

Protein: gi|21537185, gi|...
Organism: Arabidopsis thaliana
Length: 527 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|21537185, gi|....

Description E-value Query
Range
Subject
Range
gi|114657936 - gi|114657936|ref|XP_001175096.1| PREDICTED: hypothetical protein isoform 11 [Pan troglodytes]
587.0 [0..5] [526..80]

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Predicted Domain #1
Region A:
Residues: [1-527]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSSHLLLEE PIRMASILEP SKSSFFPALT KIVGTLGPKS RSVEALSGCL KAGMSVARFD  60
   61 FSWGDADYHQ ETLDNLKVAV RSTKKLCAVM LDTVGPELQV INKSEKAITL KADGLVTLTP 120
  121 NQDQEASSEV LPINFNGLAK AVKKGDTIFV GQYLFTGSET TSVWLEVDEV KGDDVICLSR 180
  181 NAATLAGSLF TLHSSQVHID LPTLTEKDKE VISTWGVQNK IDFLSLSYCR HAEDVRQTRE 240
  241 MLKKLGDLSQ TQIFAKIENV EGLTHFDEIL QEADGIILSR GNLGIDLPPE KVFLFQKAAL 300
  301 YKCNMAGKPA VLTRVVDSMT DNLRPTRAEA TDVANAVLDG SDAILLGAET LRGLYPVETI 360
  361 STVGRICAEA EKVFNQDLYF KKTVKYVGEP MTHLESIASS AVRAAIKVKA SVIICFTSSG 420
  421 RAARLIAKYR PTMPVISVVI PRVKTNQLKW SFSGAFEARQ SLIVRGLFPM LADPRHPAES 480
  481 TSATNESVLK VALDHGKHAG VIKSHDRVVV CQKVGDASVV KIIELED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 166.0
Match: 1zjhA
Description: Structure of human muscle pyruvate kinase (PKM2)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle