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View Structure Prediction Details

Protein: PLP9_ARATH
Organism: Arabidopsis thaliana
Length: 384 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLP9_ARATH.

Description E-value Query
Range
Subject
Range
gi|7523402, gi|1... - gi|7523402|emb|CAB86421.1| putative protein [Arabidopsis thaliana], pir||T48109 hypothetical protein...
298.0 [0..3] [384..1]

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Predicted Domain #1
Region A:
Residues: [1-384]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMDLSKVTL DIFTKLEQKW LSHCDSSRKT RILSIDGGGT TGIVAAASIL HLEHQIRLQT  60
   61 GDPHAHISDF FDIVAGTGIG GILAALLVAD DGSGRPMFTA RDAVKFVAEK NSELFEIRYT 120
  121 GVFRRNKRYS GKSMERVLET AFRREDGKVL TMKDTCKPLL VPCYDLKTSA PFVFSRAGAS 180
  181 ESPSFDFELW KVCRATSATP SLFKPFSVVS VDGKTSCSAV DGGLVMNNPT AAAVTHVLHN 240
  241 KRDFPSVNGV DDLLVLSLGN GPSTMSSSPG RKLRRNGDYS TSSVVDIVVD GVSDTVDQML 300
  301 GNAFCWNRTD YVRIQANGLT SGGAEELLKE RGVETAPFGV KRILTESNGE RIEGFVQRLV 360
  361 ASGKSSLPPS PCKESAVNPL ADGR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 60.39794
Match: 1oxwA
Description: Patatin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.15125075554295 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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