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View Structure Prediction Details

Protein: gi|24030493, gi|...
Organism: Arabidopsis thaliana
Length: 572 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24030493, gi|....

Description E-value Query
Range
Subject
Range
gi|6554491, gi|2... - gi|6554491|gb|AAF16673.1|AC012394_22 putative auxin-independent growth promoter; 88924-91907 [Arabid...
864.0 [0..1] [572..1]

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Predicted Domain #1
Region A:
Residues: [1-89]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFHRRRYPY YNRLRRLLPL VIAVSLSLLI LFAFLSFLAP PPGDSDRLPP RVRYSSNDAI  60
   61 KATGFHIPRA GGRSDRDIWR SRNAEFFFG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [90-480]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CSNASSKFAN SKAVTRNDRY LVIATSGGLN QQRTGIVDAV VAARILNATL VVPKLDQKSY  60
   61 WKDASDFSHI FDVDWFISFL SGDVRIIKQL PLKGGRTWST SRMRVPRKCN ERCYINRVLP 120
  121 VLLKRHAVQL NKFDYRLSNK LSDDLQKLRC RVNYHALKFT DPILTMGNEL VRRMRLRSKH 180
  181 FIALHLRYEP DMLAFSGCYY GGGDKERREL AAIRRRWKTL HINNPEKQRR QGRCPLTPEE 240
  241 VGLMLRALGY GSDVHIYVAS GEVYGGEESL APLKALFPHF YSKDTIATKE ELEPFSSYSS 300
  301 RMAALDFLVC DESDVFVTNN NGNMAKILAG RRRYLGHKPT VRPNAKKLYR LFMNKENTTW 360
  361 EEFSSKVRSF QRGFMGEPKE VRAGRGEFHE N

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.08
Match: 2hhcA
Description: No description for 2hhcA was found.

Predicted Domain #3
Region A:
Residues: [481-572]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSTCICEDTE AKAKAQLESR KLGKKNKSTN KDAAVTVTND DQTEEDDPDW SEPDYEEEQS  60
   61 DLQDRGLYNG TSLDYDDPST SDEPELEAML SD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle