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View Structure Prediction Details

Protein: Y5224_ARATH
Organism: Arabidopsis thaliana
Length: 253 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Y5224_ARATH.

Description E-value Query
Range
Subject
Range
gi|18310052, gi|... - gi|18310052|ref|NP_561986.1| 3-ketoacyl-(acyl-carrier-protein) reductase [Clostridium perfringens st...
204.0 [0..1] [234..1]

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Predicted Domain #1
Region A:
Residues: [1-253]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLPTVLVT GASGRTGQIV YKKLKEGSDK FVAKGLVRSA QGKEKIGGEA DVFIGDITDA  60
   61 DSINPAFQGI DALVILTSAV PKMKPGFDPT KGGRPEFIFE DGQYPEQVDW IGQKNQIDAA 120
  121 KVAGVKHIVV VGSMGGTNPD HPLNKLGNGN ILVWKRKAEQ YLADSGTPYT IIRAGGLLDK 180
  181 EGGVRELLVG KDDELLQTDT KTVPRADVAE VCIQALLFEE AKNKAFDLGS KPEGTSTPTK 240
  241 DFKALFSQVT SRF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.522879
Match: 1xq6A
Description: X-ray Structure of Gene Product from Arabidopsis Thaliana At5g02240
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.03099072397093 bayes_pls_golite062009
oxidoreductase activity 0.442294542097958 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle