| Protein: | PLSP1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 291 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLSP1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
311.0 | [0..1] | [291..1] |
|
|
229.0 | [0..98] | [280..8] |
|
|
229.0 | [0..98] | [280..8] |
|
|
229.0 | [0..98] | [280..8] |
|
|
217.0 | [0..104] | [285..8] |
|
|
217.0 | [0..91] | [282..4] |
|
Region A: Residues: [1-105] |
1 11 21 31 41 51
| | | | | |
1 MMVMISLHFS TPPLAFLKSD SNSRFLKNPN PNFIQFTPKS QLLFPQRLNF NTGTNLNRRT 60
61 LSCYGIKDSS ETTKSAPSLD SGDGGGGDGG DDDKGEVEEK NRLFP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [106-216] |
1 11 21 31 41 51
| | | | | |
1 EWLDFTSDDA QTVFVAIAVS LAFRYFIAEP RYIPSLSMYP TFDVGDRLVA EKVSYYFRKP 60
61 CANDIVIFKS PPVLQEVGYT DADVFIKRIV AKEGDLVEVH NGKLMVNGVA R
|
| Detection Method: | |
| Confidence: | 19.221849 |
| Match: | 1t7dA |
| Description: | Crystal structure of Escherichia coli type I signal peptidase in complex with a lipopeptide inhibitor |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [217-291] |
1 11 21 31 41 51
| | | | | |
1 NEKFILEPPG YEMTPIRVPE NSVFVMGDNR NNSYDSHVWG PLPLKNIIGR SVFRYWPPNR 60
61 VSGTVLEGGC AVDKQ
|
| Detection Method: | |
| Confidence: | 4.23 |
| Match: | 1t7dA |
| Description: | Crystal structure of Escherichia coli type I signal peptidase in complex with a lipopeptide inhibitor |
| Matching Structure (courtesy of the PDB): |
|
