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View Structure Prediction Details

Protein: FLA17_ARATH
Organism: Arabidopsis thaliana
Length: 458 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FLA17_ARATH.

Description E-value Query
Range
Subject
Range
gi|9758419 - gi|9758419|dbj|BAB08961.1| unnamed protein product [Arabidopsis thaliana]
316.0 [0..1] [438..1]

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Predicted Domain #1
Region A:
Residues: [1-303]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRRIYGGSA VIHLFLFFSV LIFSAASALS KNQSPSSGSG QINSNSVLVA LLDSRYTELA  60
   61 ELVEKALLLQ TLEDAVGRHN ITIFAPRNEA LERDLDPEFK RFLLEPGNLK SLQTLLMFHI 120
  121 IPNRVGSNQW PSEESGRVKH HTLGNDQVRL SNGQGKKMVD LAEIIRPDDL TRPDGLIHGI 180
  181 ERLLIPRSVQ EDFNRRRSLQ SISAVLPEGA PEVDPRTNRL KKPAAPVPAG SPPALPIQSA 240
  241 MAPGPSLAPA PAPGPGGKQH HFDGEAQVKD FIHTLLHYGG YNEMADILVN LTSLATEMGR 300
  301 LVS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.154902
Match: 1o70A
Description: Fasciclin I
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [304-458]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EGYVLTVLAP NDEAMAKLTT DQLSEPGAPE QIVYYHIIPE YQTEESMYNS VRRFGKVKFD  60
   61 TLRFPHKVAA KEADGSVKFG DGEKSAYLFD PDIYTDGRIS VQGIDGVLFP QEEEVVESVK 120
  121 KPVKKIVQPR RGKLLEVACS MLGAFGKDTY LSKCR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.44
Match: 1o70A
Description: Fasciclin I
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle