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View Structure Prediction Details

Protein: NDUAD_BOVIN
Organism: Bos taurus
Length: 144 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NDUAD_BOVIN.

Description E-value Query
Range
Subject
Range
gi|12005918, gi|... - gi|21361822|ref|NP_057049.3| cell death-regulatory protein GRIM19 [Homo sapiens], gi|12005918|gb|AAG...
239.0 [0..1] [144..84]
gi|111662445 - gi|111662445|gb|ABH12254.1| mitochondrial complex I subunit Grim19 [Gorilla gorilla]
NDUAD_GORGO - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Gorilla gorilla gorilla GN=NDUFA13 ...
233.0 [0..1] [144..1]
NDUAD_MACFA - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Macaca fascicularis GN=NDUFA13 PE=2...
231.0 [0..1] [144..20]
NDUAD_PANTR - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Pan troglodytes GN=NDUFA13 PE=2 SV=...
230.0 [0..1] [143..1]
gi|57101296 - gi|57101296|ref|XP_533863.1| PREDICTED: similar to NADH-ubiquinone oxidoreductase B16.6 subunit (Com...
227.0 [0..1] [144..1]
NDUAD_PONPY - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Pongo pygmaeus GN=NDUFA13 PE=2 SV=3
NDUAD_PONAB - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Pongo abelii GN=NDUFA13 PE=2 SV=3
226.0 [0..1] [143..1]
NDUAD_MOUSE - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 OS=Mus musculus GN=Ndufa13 PE=1 SV=3
226.0 [0..1] [144..1]
gi|125948123, gi... - gi|51873811|gb|AAH78619.1| Ndufa13 protein [Xenopus laevis], gi|148229783|ref|NP_001087363.1| mitoch...
226.0 [0..1] [143..1]

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Predicted Domain #1
Region A:
Residues: [1-144]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASKVKQDM PPVGGYGPID YKRNLPRRGL SGYSMFAVGI GALLFGYWSM MKWNRERRRL  60
   61 QIEDFEARIA LMPLLQAEKD RRVLQMLREN LEEEATVMKD VPGWKVGESV FHTTRWVTPM 120
  121 MGELYGLRAS EEVLSATYGF IWYT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 97.522879
Match: PF06212.3
Description: No description for PF06212.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.710 N/A N/A a.24.9 alpha-catenin/vinculin
View Download 0.667 N/A N/A a.118.19 Description not found.
View Download 0.636 N/A N/A f.13.1 Family A G protein-coupled receptor-like
View Download 0.636 N/A N/A f.13.1 Family A G protein-coupled receptor-like
View Download 0.631 N/A N/A a.118.8 TPR-like
View Download 0.631 N/A N/A a.118.8 TPR-like
View Download 0.609 N/A N/A a.24.17 Group V grass pollen allergen
View Download 0.609 N/A N/A a.24.17 Group V grass pollen allergen
View Download 0.445 N/A N/A a.133.1 Phospholipase A2, PLA2


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