| Protein: | P4KG6_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 622 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for P4KG6_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
804.0 | [0..3] | [622..1] |
|
Region A: Residues: [1-120] |
1 11 21 31 41 51
| | | | | |
1 MAMAVFKAPL KGEFHGARKM EGKQYKHHLL QQQSTGRRRV FVQTDTGCVL GVELDRNDNV 60
61 HTVKKRLQIA FNFPTEESSL TFGDMVLKND LSAVRNDSPL LLKRNLMHRS SSTPCLSPTG 120
121
|
| Detection Method: |  |
| Confidence: | 25.522879 |
| Match: | 1yx5B |
| Description: | Solution Structure of S5a UIM-1/Ubiquitin Complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.0934358341245259 | bayes_pls_golite062009 |
| protein binding | 0.03789551947602 | bayes_pls_golite062009 |
|
Region A: Residues: [121-215] |
1 11 21 31 41 51
| | | | | |
1 NDLQRKDRSG PIEILSHSPC FLSLKQTAND IVKAMKMGVE PIPVNGGLGG AYYFRDEKGQ 60
61 SVAIVKPTDE EPFAPNNPKG FVGKALGQPG LKPSV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [216-311] |
1 11 21 31 41 51
| | | | | |
1 RVGETGFREV AAYLLDYDHF ANVPPTALVK ITHSVFNVND GMDGNKSREK KKLVSSKIAS 60
61 FQKFVPHDFD ASDHGTSSFP VASVHRIGIL DIRILN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [312-456] |
1 11 21 31 41 51
| | | | | |
1 TDRHGGNLLV KKLDDGGVGR FGQVELIPID HGLCLPETLE DPYFEWIHWP QASIPFSEEE 60
61 LDYIQSLDPV KDCEMLRREL PMIREACLRV LVLCTVFLKE AAVFGLCLAE IGEMMTREFR 120
121 AGEEEPSELE MLCIEAKRLT TEQDV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [457-622] |
1 11 21 31 41 51
| | | | | |
1 LSPKSDGEGE TEFQFDIDYN ELDSVYGSET ETDEFFAKNP FSNGRSSLGE LKESIAEEEE 60
61 DDEEEAKLTL SLSKLSTSMK NNLSNTMGSG YLKPPKDNQT DKALVSHKSA NVQLPLSVNF 120
121 VKLADMKEVE WVVFLERFQE LLYSAFAERK TMTLRNTQRL GTSCKF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
