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View Structure Prediction Details

Protein: SBH1_ARATH
Organism: Arabidopsis thaliana
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SBH1_ARATH.

Description E-value Query
Range
Subject
Range
SBH2_ARATH - Sphinganine C4-monooxygenase 2 OS=Arabidopsis thaliana GN=SBH2 PE=1 SV=1
194.0 [0..2] [260..1]

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Predicted Domain #1
Region A:
Residues: [1-81]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMGFAVSDE LLGTVAPIVV YWLYSGIYVA LSSLESYRLH SKVEEEEKNL VSKSSVVKGV  60
   61 LVQQVVQAVV AILLFTVTGS D

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [82-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AEADKAQQFS FLVLARQFVT AMIVLDTWQY FMHRYMHQNK FLYKHIHSQH HRLIVPYAYG  60
   61 ALYNHPVEGL LLDTIGGALS FLVSGMSPRT SIFFFSFATI KTVDDHCGLW LPGNLFHMVF 120
  121 KNNSAYHDIH HQLYGTKYNF SQPFFVMWDR ILGTYMPYSL EKREDGGFEA RPTKEFKDD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 35.823909
Match: PF04116.4
Description: No description for PF04116.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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