| Protein: | PPI1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 612 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PPI1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
240.0 | [0..37] | [594..1843] |
|
Region A: Residues: [1-353] |
1 11 21 31 41 51
| | | | | |
1 MGVEVVNSGG FEVAPAPFEG KPEKNGKLDQ GKGDDAPINF GSVGELPKNA EENNNKVVNS 60
61 DAPKNAAEEW PVAKQIHSFY LVKYRSYADP KIKAKLDLAD KELEKLNKAR TGVLDKLRAK 120
121 RAERSELFDL LDPLKSERKG FNTMFDEKRK EMEPLQQALG KLRSNDGGSA RGPAICSSEE 180
181 ELNSMIYSYQ YRIQHESIPL TEEKQILKEI RLLEGTRDKV IANAAMRAKI KESMGQKDDI 240
241 QGQVKLMGAG LDGVKKERQA ISARINELSE KLKATKDEIT VLENELKTVS EKRDKAYSNI 300
301 HDLRRQRDET NSEYYQNRTV LNKARDLAAQ KNISELEALA NAEVEKFISL WCS
|
| Detection Method: |  |
| Confidence: | 16.221849 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [354-612] |
1 11 21 31 41 51
| | | | | |
1 KKNFREDYEK RILQSLDSRQ LSRDGRMRNP DEKPLIAPEA APSKATPSET EVVPKAKAKP 60
61 QPKEEPVSAP KPDATVAQNT EKAKDAVKVK NVADDDDDEV YGLGKPQKEE KPVDAATAKE 120
121 MRKQEEIAKA KQAMERKKKL AEKAAAKAAI RAQKEAEKKE KKEQEKKAKK KTGGNTETET 180
181 EEVPEASEEE IEAPVQEEKP QKEKVFKEKP IRNRTRGRGP ETIPRAILKR KKSTNYWVYA 240
241 APAALVVLLL LVLGYYYVL
|
| Detection Method: | |
| Confidence: | 0.966 |
| Match: | 1miuA |
| Description: | BRCA2 helical domain; BRCA2 tower domain; OB-fold domains of BRCA2 |
Matching Structure (courtesy of the PDB): |
|
