| Protein: | LDL1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 844 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for LDL1_ARATH.
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Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MSTETKETRP ETKPEDLGTH TTVDVPGEEP LGELIADDVN EVVSDASATE TDFSLSPSQS 60
61 EQNIEEDGQN SLDDQSPLTE LQP
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| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [84-147] |
1 11 21 31 41 51
| | | | | |
1 LPLPPPLPVE ARISESLGEE ESSDLVTEQQ SQNPNAAEPG PRARKRRRRK RFFTEINANP 60
61 AFSR
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| Detection Method: | |
| Confidence: | 23.221849 |
| Match: | 1h7xA |
| Description: | Dihydropyrimidine dehydrogenase, N-terminal domain; Dihydropyrimidine dehydrogenase, domain 4; Dihydropyrimidine dehydrogenase, domain 3; Dihydropyrimidine dehydrogenase, domain 2; Dihydropyrimidine dehydrogenase, C-terminal domain |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [148-724] |
1 11 21 31 41 51
| | | | | |
1 NRRTSVGKEV DSEALIAMSV GFPVYSLTEE EIEANVVSII GGKDQANYIV VRNHIIALWR 60
61 SNVSNWLTRD HALESIRAEH KTLVDTAYNF LLEHGYINFG LAPVIKEAKL RSFDGVEPPN 120
121 VVVVGAGLAG LVAARQLLSM GFRVLVLEGR DRPGGRVKTR KMKGGDGVEA MADVGGSVLT 180
181 GINGNPLGVL ARQLGLPLHK VRDICPLYLP NGELADASVD SKIEASFNKL LDRVCKLRQS 240
241 MIEENKSVDV PLGEALETFR LVYGVAEDQQ ERMLLDWHLA NLEYANATLL GNLSMAYWDQ 300
301 DDPYEMGGDH CFIPGGNEIF VHALAENLPI FYGSTVESIR YGSNGVLVYT GNKEFHCDMA 360
361 LCTVPLGVLK KGSIEFYPEL PHKKKEAIQR LGFGLLNKVA MLFPCNFWGE EIDTFGRLTE 420
421 DPSTRGEFFL FYSYSSVSGG PLLVALVAGD AAERFETLSP TDSVKRVLQI LRGIYHPKGI 480
481 VVPDPVQALC SRWGQDKFSY GSYSYVAVGS SGDDYDILAE SVGDGRVFFA GEATNRQYPA 540
541 TMHGAFLSGM REAANILRVA RRRASSSALN PNQICID
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| Detection Method: | |
| Confidence: | 61.30103 |
| Match: | 2v1dA |
| Description: | No description for 2v1dA was found. |
|
Region A: Residues: [725-844] |
1 11 21 31 41 51
| | | | | |
1 KEEEVDEEED RCLDQLFETP DLTFGNFSVL FTPNSDEPES MSLLRVRIQM EKPESGLWLY 60
61 GLVTRKQAIE LGEMDGDELR NEYLREKLGL VPVERKSLSQ EGESMISSLK AARLNRQIFD 120
121
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
