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View Structure Prediction Details

Protein: gi|23505903, gi|...
Organism: Arabidopsis thaliana
Length: 357 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23505903, gi|....

Description E-value Query
Range
Subject
Range
gi|82542049 - gi|82542049|gb|ABB82032.1| TIR-NBS disease resistance-like protein [Populus trichocarpa]
278.0 [0..3] [355..6]

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Predicted Domain #1
Region A:
Residues: [1-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSSSRNW LYDVFLSFRG GDVRVTFRSH FLKEFDRKLI TAFRDNEIER SHSLWPDLEQ  60
   61 AIKDSRIAVV VFSKNYASSS WCLNELLEIV NCNDKIIIPV FYGVDPSQVR YQIGDFGRIF 120
  121 EKTCKRQTEE VKNQWKKALT LVANMLGFDS AKWDDEAKMI EEIANDVLRK LLLTTSKDFD 180
  181 DFVGLEDHIA NMSALLDLES KEVKMVGIWG SSGIGKTTIA RALFNNLFRH FQVRKFIDRS 240
  241 FAYKSREIHS SANPDDHNMK LHLQESFLSE ILRMPNIKID DPTALEERLK YQKVLIIIDD 300
  301 LDDIMVLDTL VGQTQWFGYG SRIIVVTNDK HFLTAHGIDH IYETRLCGDA PFATRNG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.09
Match: 1z6tA
Description: Structure of the apoptotic protease-activating factor 1 bound to ADP
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle