| Protein: | VAP43_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 287 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VAP43_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
275.0 | [0..1] | [287..1] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MALTEDKSDS DGRRWGKFKL PFRNSNSQAP SASSSSSMAT SSSSVTSSHL NQNYIHQSRH 60
61 FQYHGPPVVE GLGQNHHQSA ATIPSMSSVA RSLLP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [96-287] |
1 11 21 31 41 51
| | | | | |
1 TKRRLKLDPS AKLYFPYEPG KQVRSAIKIK NTSKSHVAFK FQTTVPKSCF MRPAGAILAP 60
61 GEEIIATVFK FVEPPENNEK PMEQKSGVKF KIMSLKMKVP TDYMPELFEE QKDHVSEEQV 120
121 MRVVFLDPEN PNSMMEKLKS QLAEADAADE ARKKASEGIV GPKPIGEGLV IDEWKQRRER 180
181 YLAQQQGGVD AA
|
| Detection Method: | |
| Confidence: | 35.69897 |
| Match: | 2criA |
| Description: | Solution structure of the MSP domain of mouse VAMP-associated proteinA |
Matching Structure (courtesy of the PDB): |
|
