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View Structure Prediction Details

Protein: ATPE_NYMAL
Organism: Nymphaea alba
Length: 134 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATPE_NYMAL.

Description E-value Query
Range		 Subject
Range
ATPE_SPIOL - ATP synthase epsilon chain, chloroplastic OS=Spinacia oleracea GN=atpE PE=1 SV=1
 175.0 [0..1] [133..1]
ATPE_JASNU - ATP synthase epsilon chain, chloroplastic OS=Jasminum nudiflorum GN=atpE PE=3 SV=1
 174.0 [0..1] [133..1]
gi|110456644 - gi|110456644|gb|ABG74763.1| ATPase epsilon subunit [Jasminum leratii]
 174.0 [0..1] [133..1]
gi|110456681 - gi|110456681|gb|ABG74790.1| ATPase epsilon subunit [Jasminum abyssinicum]
 173.0 [0..1] [133..1]
ATPE_PIPCE - ATP synthase epsilon chain, chloroplastic OS=Piper cenocladum GN=atpE PE=3 SV=1
 172.0 [0..1] [133..1]
gi|110456713 - gi|110456713|gb|ABG74816.1| ATPase epsilon subunit [Jasminum subhumile]
 172.0 [0..1] [133..1]
ATPE_GOSHI - ATP synthase epsilon chain, chloroplastic OS=Gossypium hirsutum GN=atpE PE=3 SV=1
ATPE_GOSBA - ATP synthase epsilon chain, chloroplastic OS=Gossypium barbadense GN=atpE PE=3 SV=1
 172.0 [0..1] [133..1]
ATPE_MORIN - ATP synthase epsilon chain, chloroplastic OS=Morus indica GN=atpE PE=3 SV=1
 172.0 [0..1] [133..1]
ATPE_DRIGR - ATP synthase epsilon chain, chloroplastic OS=Drimys granadensis GN=atpE PE=3 SV=1
 172.0 [0..1] [134..1]
gi|110456610 - gi|110456610|gb|ABG74737.1| ATPase epsilon subunit [Forsythia europaea]
 172.0 [0..1] [133..1]

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Predicted Domain #1
Region A:
Residues: [1-134] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLNLCVLTP NRIIWDSEVK EIILSTNSGQ IGVLPNHAPI ATAIDIGILR IRLDDQWLTM  60
   61 ALMGGFARIG NNEITILVND AEKGSDIDPQ EAQRTLEIAE ANLSKAEGKR QVIEANLALR 120
  121 RARARVEAIN AISY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.69897
Match: 2e5yA
Description: No description for 2e5yA was found.
YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle