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View Structure Prediction Details

Protein: gi|215715298, gi...
Organism: Oryza sativa Japonica Group
Length: 731 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|215715298, gi....

Description E-value Query
Range
Subject
Range
gi|32813435 - gi|32813435|dbj|BAC77269.2| SCARECROW-like protein [Lilium longiflorum]
813.0 [0..20] [730..9]

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Predicted Domain #1
Region A:
Residues: [1-185]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLDNNFGEL SGMFCGLSYD GYTDHGSQSD YFRFADPQPA IVPQMDAGPS SAASSTASRA  60
   61 AVSSGTDNPE DWEFISDESL NYISRMLMEE DIDEKVSMYQ EESAALRAAA KPFYDILGHK 120
  121 FPPSPDRQLV AWPLDSPSES STSSYPHSLA SSVTSSNISG AVDSSQRRYV GHSEYRSLSG 180
  181 HSSQP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [186-330]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVGPSSDVRN AMETLEDPLI SNGRIPEYLF ESFPTWDFRR GVDEAQKFLP GSDKVVIDLE  60
   61 AGGVAKRQEA GKAISLNVSK AEVLKVKKNR QSEDLDVMEG RNSKQSAFCS DEPDWIEMFD 120
  121 VLLRQTEKKA TDLRKMMRFE ASKNS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [331-440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QVAQPKGPSG TRSRGRKPTK KDVVDLRTLL IHCAQAVAAD DRRTANELLK QIRQHAKPNG  60
   61 DGSQRLAYCF ADGLEARLAG TGSQLYHKLV AKRTTASDML KAYHLYLAAC 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [441-565]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PFKRLSHFLS NQTILSLTKN ASKVHIIDFG IYFGFQWPCL IRRLFKREGG PPKLRITGID  60
   61 VPQPGFRPTE RIEETGQRLA EYAEKIGVPF EYQGIASKWE TICVEDLNIK KDEVVIVNCL 120
  121 YRFRN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [566-731]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LIDETVAIDS PRNRVLNTIR QVNPAIFIHG IVNGSYSVPF FITRFREALF HFSALFDMLE  60
   61 TTVPRDDAQR ALIERDLFGR EALNVIACEG SDRVERPETY KQWQVRNLRA GFVQSPLNQD 120
  121 IVLKAKDKVK DIYHKDFVID EDSEWLLQGW KGRIIYAIST WKPNNN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle