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View Structure Prediction Details

Protein: GRF8_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 409 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GRF8_ORYSJ.

Description E-value Query
Range
Subject
Range
gi|108864497, gi... - gi|215736930|dbj|BAG95859.1| unnamed protein product [Oryza sativa Japonica Group], gi|108864497|gb|...
346.0 [0..141] [409..3]

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Predicted Domain #1
Region A:
Residues: [1-154]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSSCGGHGH GNPRSLQEEH HGRCGEQQGG GGGGGQEQEQ DGFLVREARA SPPSPSSSSF  60
   61 LGSTSSSCSG GGGGGQMLSF SSPNGTAGLG LSSGGSMQGV LARVRGPFTP TQWMELEHQA 120
  121 LIYKHIAANV SVPSSLLLPI RRSLHPWGWG SFPP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [155-306]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GCADVEPRRC RRTDGKKWRC SRDAVGDQKY CERHINRGRH RSRKHVEGRK ATLTIAEPST  60
   61 VIAAGVSSRG HTVARQKQVK GSAATVSDPF SRQSNRKFLE KQNVVDQLSP MDSFDFSSTQ 120
  121 SSPNYDNVAL SPLKLHHDHD ESYIGHGAGS SS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [307-409]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKGSMMYESR LTVSKETLDD GPLGEVFKRK NCQSASTEIL TEKWTENPNL HCPSGILQMA  60
   61 TKFNSISSGN TVNSGGTAVE NLITDNGYLT ARMMNPHIVP TLL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle