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View Structure Prediction Details

Protein: GRF1_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GRF1_ORYSJ.

Description E-value Query
Range
Subject
Range
gi|6573149 - gi|6573149|gb|AAF17567.1|AF201895_1 growth-regulating factor 1 [Oryza sativa]
GRF1_ORYSI - Growth-regulating factor 1 OS=Oryza sativa subsp. indica GN=GRF1 PE=2 SV=1
447.0 [0..1] [397..1]

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Predicted Domain #1
Region A:
Residues: [1-177]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMMMSGRPSG GAGGGRYPFT ASQWQELEHQ ALIYKYMASG TPIPSDLILP LRRSFLLDSA  60
   61 LATSPSLAFP PQPSLGWGCF GMGFGRKAED PEPGRCRRTD GKKWRCSKEA YPDSKYCEKH 120
  121 MHRGKNRSRK PVEMSLATPP PPSSSATSAA SNTSAGVAPT TTTTSSPAPS YSRPAPH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [178-281]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DAAPYQALYG GPYAAATART PAAAAYHAQV SPFHLQLDTT HPHPPPSYYS MDHKEYAYGH  60
   61 ATKEVHGEHA FFSDGTEREH HHAAAGHGQW QFKQLGMEPK QSTT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [282-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLFPGAGYGH TAASPYAIDL SKEDDDEKER RQQQQQQQQQ HCFLLGADLR LEKPAGHDHA  60
   61 AAAQKPLRHF FDEWPHEKNS KGSWMGLEGE TQLSMSIPMA ANDLPITTTS RYHNDD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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Created and Maintained by: Michael Riffle