| Protein: | PTR24_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 538 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTR24_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
291.0 | [0..8] | [534..2] |
|
Region A: Residues: [1-452] |
1 11 21 31 41 51
| | | | | |
1 MAITYSSADE LGNTTEGFLE IRENTSGGWK SARLIIVVQM AERFAYFGIA SNLIMYLTGP 60
61 LGESTAAAAA NVNAWTGTVA FLPLLGGFLA DSYLGRFRTI IISSSLYILG LGLLSFSTMI 120
121 PSHQSKDSNQ LQETIFFFSL YLVAIGQGGY NPCIKVFGAD QFDGNDHKEA RDKSSFFNWL 180
181 MFGNCISILT TRLVSTYIQE NLSWSLGFGI PSVSMLLSLF LFLLGTTSYR FSTERVGKKN 240
241 PFARISRVFM EALKNRRQPD LDIANANANE TLLLLAHQSS KQFRFLDRAA ISCELAEIEE 300
301 AKAVLRLIPI WITSVVYTIV HAQSPTFFTK QGATMDRSIS PGLLVPAATL QSFINLSVVV 360
361 FIPIYDRLLV PFARSFTQNS SGITTLQRIG TGIFLSILAM VLAALVETKR LQAARDELSI 420
421 PMSVWWLIPQ YVIFGVSDMF TMVGLQEFFY GQ
|
| Detection Method: |  |
| Confidence: | 8.522879 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 2.54286095434601 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.01247278444729 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.77039368764865 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.66673693200184 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 1.27747734153012 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.33203350453105 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.24475883286552 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.24475883286552 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.2309068592963 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.18188709249385 | bayes_pls_golite062009 |
| binding | 0.105551689569449 | bayes_pls_golite062009 |
| glycerol-3-phosphate transmembrane transporter activity | 1.26964387230144E-4 | bayes_pls_golite062009 |
|
Region A: Residues: [453-538] |
1 11 21 31 41 51
| | | | | |
1 VPSELRSVGM ALNLSIYGAG NYLSSFMISV IDKITNQYGQ RSWFDNDLDQ AHLDYFYWLL 60
61 ACLGFIGFAF YLWFAKSYVY SRSNTF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
