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View Structure Prediction Details

Protein: GATL7_ARATH
Organism: Arabidopsis thaliana
Length: 361 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GATL7_ARATH.

Description E-value Query
Range
Subject
Range
gi|7362746, gi|1... - gi|7362746|emb|CAB83116.1| putative protein [Arabidopsis thaliana], pir||T48055 hypothetical protein...
305.0 [0..5] [361..1]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLWIMRFSGL FSAALVIIVL SPSLQSFPPA EAIRSSHLDA YLRFPSSDPP PHRFSFRKAP  60
   61 VFRNAADCAA ADIDSGVCNP SLVHVAITLD FE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [93-361]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YLRGSIAAVH SILKHSSCPE SVFFHFLVSE TDLESLIRST FPELKLKVYY FDPEIVRTLI  60
   61 STSVRQALEQ PLNYARNYLA DLLEPCVRRV IYLDSDLIVV DDIAKLWMTK LGSKTIGAPE 120
  121 YCHANFTKYF TPAFWSDERF SGAFSGRKPC YFNTGVMVMD LERWRRVGYT EVIEKWMEIQ 180
  181 KSDRIYELGS LPPFLLVFAG EVAPIEHRWN QHGLGGDNVR GSCRDLHPGP VSLLHWSGSG 240
  241 KPWFRLDSRR PCPLDTLWAP YDLYGHYSR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 37.221849
Match: 1g9rA
Description: Galactosyltransferase LgtC
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.3567084433464 bayes_pls_golite062009
transferase activity 1.04375515050786 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle