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View Structure Prediction Details

Protein: gi|124505151, gi...
Organism: Plasmodium falciparum 3D7
Length: 371 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|124505151, gi....

Description E-value Query
Range
Subject
Range
gi|124507289, gi... - gi|23613887|ref|NP_704908.1| rifin [Plasmodium falciparum 3D7], gi|23613002|ref|NP_704541.1| RIFIN [...
459.0 [0..1] [371..1]
gi|23305099 - gi|23305099|gb|AAN17004.1|AF483823_1 variant surface antigen rifin [Plasmodium falciparum]
419.0 [0..1] [355..1]

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Predicted Domain #1
Region A:
Residues: [1-66]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVHYFNIFL FSLPLNIILL SSQVYNQRNH YMKPHTYTNR SLCECELYAP SNYDNDPEMK  60
   61 AVMQGF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [67-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRQTSQRFEE YNERLLENKQ KCKEQCNKEI QKIILKDKLE KELMDKIVTL DTDIQSDAIP  60
   61 TCVCEKSVAD KVEKTCLKCA GVLGGGVTPA WGLISGIVYT GWKTAALAAA TKEAIAEAAA 120
  121 KGAAAGLKAG VKSVISEVSS LFGVSTIDDK ALGLVINAT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [226-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYRDAQLISG AIYKQFEMTC MPPGALPNLS NPICISMWSK FVSTNGSSRD LIKNNIKTYV  60
   61 QSFVSQAETT AAHVTKTTTE KVTTELTTEK TGEIAATYMG YQTPIIASIV AILVIVLVMV 120
  121 IIYLILRYRR KKKMKKKLQY IKLLEE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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