| Protein: | gi|50199436 |
| Organism: | Plasmodium falciparum |
| Length: | 653 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|50199436.
| Description | E-value | Query Range |
Subject Range |
|
|
421.0 | [0..319] | [651..192] |
|
|
417.0 | [0..319] | [651..190] |
|
|
411.0 | [0..282] | [651..127] |
|
|
410.0 | [0..319] | [651..209] |
|
|
409.0 | [0..277] | [651..152] |
|
|
405.0 | [0..308] | [652..190] |
|
|
404.0 | [0..314] | [652..212] |
|
Region A: Residues: [1-111] |
1 11 21 31 41 51
| | | | | |
1 MNNKNDEGQK LKRKSLYENY HKINQTSLLS HNSLEIDMKG FLNLLIIIIC TTHFRLILEN 60
61 FKKYGLIIKI PKNCDLVKNL PLLFCFISLH VTIFFSWFIE RYVTSWLYTC I
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [112-311] |
1 11 21 31 41 51
| | | | | |
1 DEDDQHTFKN IPMDDLSNKT DMIIEKKNYK SLYPNLIRRK KKNNTINNDN ENNNNNNNSN 60
61 NNNSNNNNNS NNNNSNNNNN NNNNNYNNCL HKDPPSIYSY DSNTTYENEP YDKFDKDNST 120
121 YDKCDKDILC DKKDSKQTCN DICKKKLKEL KNNNTEKNNN NNNNNNYINT CAHNIHTHIK 180
181 DDDISTSSCL KKKKKKKVHG
|
| Detection Method: | |
| Confidence: | 1.68 |
| Match: | 1dv4A |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [312-529] |
1 11 21 31 41 51
| | | | | |
1 WKSFHLSIFL LRCINSIFIL LFPLLTISYY DTEPTLSSIL LTISIVWFFK FYSFHEVCYE 60
61 ARKLHIENVD LKNLIEDDLS SEMYYIKRYP YCLDLKSYYT YILMPTMCFQ FFYPRTEKIR 120
121 WIHVAKHIFE VILLIIMIKI ISDQYMFITV ENTFTMKEFT SAHFSVKITH IIERMLKVSI 180
181 PTLYIWLIGF LIVFHHWCNI LAEITRFGDR LFYKDWWN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [530-653] |
1 11 21 31 41 51
| | | | | |
1 ASSFAEYWRK WNLPIYYFVC RHINKPLIYY GIHRNVSMII VFFISAMLHE YLISIPLKLG 60
61 FTGYIFFAFI CQIPLVQFTN NAYFKKHKTI GNSIFWIVFC FTGQPLILFI YYYLWIDKQG 120
121 TLKN
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
