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View Structure Prediction Details

Protein: gi|7494260
Organism: Plasmodium falciparum
Length: 1119 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7494260.

Description E-value Query
Range
Subject
Range
gi|82539404 - gi|82539404|ref|XP_724092.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
gi|23478621 - gi|23478621|gb|EAA15657.1| TAP1 protein [Plasmodium yoelii yoelii]
522.0 [0..205] [874..1]
gi|23613775, gi|... - gi|23613775|ref|NP_704796.1| hypothetical protein [Plasmodium falciparum 3D7], gi|23505158|emb|CAD51...
448.0 [0..143] [770..6]
gi|68076195 - gi|68076195|ref|XP_680017.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56500883 - gi|56500883|emb|CAI05288.1| conserved hypothetical protein [Plasmodium berghei]
439.0 [0..58] [583..25]
gi|70945378 - gi|70945378|ref|XP_742515.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56521542 - gi|56521542|emb|CAH76452.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
309.0 [0..903] [1119..364]
gi|26335321 - gi|26335321|dbj|BAC31361.1| unnamed protein product [Mus musculus]
285.0 [0..487] [863..157]
COL12_RAT - Collectin-12 OS=Rattus norvegicus GN=Colec12 PE=2 SV=1
274.0 [0..487] [863..157]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNIYISLYI FFISYIIQLC FNTKYIYCDK KLYVSKNILP SVEKKEFVSN VPHKLEWLVH  60
   61 NILEVVHFLE DVNNYIVDFK KDILTKLEHI VQDDTELYES YEYNENLLNQ IYLNNEKKLK 120
  121 RYSEYIEKLK DTKLQMFEDT INNFQRENIY YLNFVYKNLL AKIDLITNLN KKKLDKEKKK 180
  181 NVIELKEYLE DLKKRMFDMQ KRLNDIIITK STFLK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [216-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NESELNMKLF ETSAIDYVNN NSNFEVFSTY IINDFMLNKK RINVLNYDSN LFFKNNFMYF  60
   61 NFLHNYLKEK KDEHVLNVYI YLKDPLIQEY ELNYFNYYVV LDLYILDVII KNVDLLIEKK 120
  121 GKKRKN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [342-556]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VNHILVCIDN YVVKYNVLSS NIYLDIQQDI KSFFHESNRN VDGSKIQDML FHFERKNNSI  60
   61 YQNNMFHDKY YKKKIKKDIK EEKKQNDSLQ KYNKNIDPLL FIRKKNIFFD SQKEYYKKFL 120
  121 SSYTYEEIVN ILCNKSSRCN NRIFQLINDV NKNTFILKSH LALKNELKKF FQINQNKLLK 180
  181 NKTGVGLINS TKDDINRITN MNLATNTNNA MGNIT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [557-728]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NDSNIINTNN NNNTSDINNN NTSDINNNNT NNINNNNTNN INNNNTNNIN NNTNNTNNNS  60
   61 NNNNNNNIFN NEDSLNKCSA YTYPFSNDAE KNYQENRNQS FSNSDHCFKL LNSIQGANKS 120
  121 SDFINMQNID DYLNTYYVAY HESFKVVKKE HYYSVISHIF ESYLNIDESS ND

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [729-898]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDHPIHKKYP HLKGRNVSIN FLGQLPEIMK VYKTFRYCDS LNVLAKSYIP KSPASVQSLD  60
   61 KGEDNNDNDE KGESGEDTQV IEKDDSGEDR QMIEKDDSGE DRQMIEKDDS GEDRQMIEKD 120
  121 DSGEDRQMIE KDDSGEDRQM IEKDDSGEDR QMIEKDKSRD DNKAQNNNST 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.221849
Match: 1y0fB
Description: No description for 1y0fB was found.

Predicted Domain #6
Region A:
Residues: [899-1119]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DNEEHDEITE QIGFLKNHNQ KYMRLFQKHL LEEIKFINFF EFLVQKKLGV ILEKNEFLKL  60
   61 YIFYGQKNLP SMPYTPLFFT CRTIIKIEVL RDVNTNQIIY SSRSFFLETL ITLKEYKIKN 120
  121 ESAYIVIETT DESSTIKKRL KMDMLHKISP MSHINAYVIS NKGKEIVYHK GNIYQRSASD 180
  181 IKNVISDIRN DFLNIILPQY HLFDLFDNYV YIIICLKNEN C

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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