YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|23957751, gi\|...
Organism:	Plasmodium falciparum 3D7
Length:	145 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23957751, gi|....

Description	E-value	Query Range	Subject Range
gi\|38104134, gi\|... - gi\|39945050\|ref\|XP_362062.1\| hypothetical protein MG04507.4 [Magnaporthe grisea 70-15], gb\|EAA50748....	162.0	[0..1]	[145..7]
gi\|11282327, gi\|... - gi\|7406424\|emb\|CAB85533.1\| putative protein [Arabidopsis thaliana], gi\|28827482\|gb\|AAO50585.1\| unkno...	157.0	[0..1]	[143..4]
gi\|11282328, gi\|... - gi\|9367303\|emb\|CAB97319.1\| conserved hypothetical protein [Neurospora crassa], pir\|\|T50999 hypotheti...	154.0	[0..1]	[145..3]
gi\|116192395, gi... - gi\|88181828\|gb\|EAQ89296.1\| conserved hypothetical protein [Chaetomium globosum CBS 148.51], gi\|11619...	151.0	[0..1]	[145..5]
gi\|218199540 - gi\|218199540\|gb\|EEC81967.1\| hypothetical protein OsI_25868 [Oryza sativa Indica Group] gi\|28971996, gi\|... - gi\|34901426\|ref\|NP_912059.1\| synbindin-like protein [Oryza sativa (japonica cultivar-group)], gi\|289...	150.0	[0..1]	[142..6]
gi\|66853479, gi\|... - gi\|71002320\|ref\|XP_755841.1\| Sybindin-like family protein [Aspergillus fumigatus Af293], gi\|66853479... gi\|159129898 - gi\|159129898\|gb\|EDP55012.1\| Sybindin-like family protein [Aspergillus fumigatus A1163]	149.0	[0..1]	[137..3]
gi\|119195975, gi... - gi\|90307377\|gb\|EAS37008.1\| hypothetical protein CIMG_02362 [Coccidioides immitis RS], gi\|119195975\|r... gi\|240110581 - gi\|240110581\|gb\|EER28739.1\| Sybindin-like family protein [Coccidioides posadasii C735 delta SOWgp]	148.0	[0..1]	[143..3]

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Predicted Domain #1

Region A:
Residues: [1-145]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYSLYVNNQH GTLVYQKHFS EEIKLNSNEE IRLASMLHGI STISEKINVY SLYEKKTNIF  60
   61 QSLEKKGIET IEGDGFKIQC YDTLTGIKIF IVHKDDLNIE MNTYLKRVYE LYSDIILKNP 120
  121 FYDIDMPIRS AVFNEQIEKL FSNIS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.0
Match:	2j3tD
Description:	No description for 2j3tD was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits