| Protein: | gi|23957728, gi|... |
| Organism: | Plasmodium falciparum 3D7 |
| Length: | 1114 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23957728, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
232.0 | [0..4] | [1053..684] |
|
|
228.0 | [0..14] | [1040..1467] |
|
|
209.0 | [0..237] | [1102..3] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MMKIFINNVN TYSGSCFCKT FDEIKNEKTT IYGTVDDHNL SKEDCIFYNY DNVKKIISKI 60
61 PKDNIVKYIL KCKLVIYDLH NTDLEEIEYV IRKLKYEKIK HNMTIILISS IM
|
| Detection Method: |  |
| Confidence: | 3.045757 |
| Match: | 2nyyA |
| Description: | No description for 2nyyA was found. |
|
Region A: Residues: [113-1039] |
1 11 21 31 41 51
| | | | | |
1 TWSKTKRKFI KKIVEENKEI TKNQSNNITH KSGETNNNLE KKENQNIETK NEKTSKKKDK 60
61 KKNENYNKNN KIVDHGVHNK QANIIKNEDA KSNIQEIHIE EIKKKEKILY IPQIFNEKDY 120
121 LKRISSTHFD EYKSVETLML SLNSMKNIKT HVVVSGLLYG NGENVFFSIF KNAWLSKDNH 180
181 IIDKGDNYIP VIHIRGLCEY IKQLYISESK KKYLIAVDNQ YITQKEIIHT IASHISGNMN 240
241 FMHVSPHESI FYEHSEKLCV NLRFQCTNIY DDNQVDEQEK KKKLNKKNKN KNKNDEGDIS 300
301 DHHKEDNHSE TDNNDSEKKE SNTEDDNIDS EQNSSINMNN SNDDSQNSSN SESNNNDDND 360
361 SNNSNEKKKG KKENNNLKEK KNKSKNKNKK KNLITFHCQD GFINNISIIA KEFCEFRNLK 420
421 NLKVLIIGQP GVGKTFIAKK ICDHYNLIMC SINMLIDEYK KKTDYTFPKY YQEYINELDN 480
481 EKKKNVPPKK LTLSDLCSLF YSKLENNECK FRGFVLDFFP RNYEEAKYFF DNYKMDVPEK 540
541 EKEMKNGKRD EDDTNRKGNN KSKKKIKKKK NERNDKEEDD NDKDEDDNDK DEDDNDKEED 600
601 ENDKDEDDND KEEDENDKDE DNEDNENDKD EDDKDEDDKD EDDKDEDDKD EDDKDEDDKD 660
661 EDDKDEDDED DNDKDEDDND KEEDDNDNDN DIEENDNTED SDYREDNDDE KISGNSENTN 720
721 MMTHSDEESQ SVKQMSNKKK KKKKKKKILE NINKYIIMPE FVIILKSTEE LCKKRMMNLP 780
781 ENEIIKGHND EMGFERRHKK YINENCRNDY FEFDQKQSIE DYFIEHDIEV YTLNINENTL 840
841 LEHILTNIYI FIEKNVKFNN FLPSTDEMLK NKLQEEQQIL MDEKQKIKDI EDKVVLEEIK 900
901 QNDDLIKAEK KRQQLLIKHQ QQYIHNQ
|
| Detection Method: | |
| Confidence: | 8.30103 |
| Match: | 1epwA |
| Description: | Botulinum neurotoxin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1040-1114] |
1 11 21 31 41 51
| | | | | |
1 SVPLRFYLIK NILPILTDAL IYICKTKPKN PCLHIAQYLL ENAHKYNIEE PNLENLQPEK 60
61 EDEDNQLGEK PKDEK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.792 | a.74.1 | Cyclin-like |
| View | Download | 0.792 | a.74.1 | Cyclin-like |
| View | Download | 0.709 | a.5.3 | N-terminal domain of phosphatidylinositol transfer protein sec14p |
| View | Download | 0.659 | a.74.1 | Cyclin-like |
| View | Download | 0.659 | a.74.1 | Cyclin-like |
| View | Download | 0.613 | a.74.1 | Cyclin-like |
| View | Download | 0.613 | a.74.1 | Cyclin-like |
| View | Download | 0.598 | a.5.10 | Description not found. |
| View | Download | 0.590 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.560 | a.74.1 | Cyclin-like |
| View | Download | 0.494 | a.74.1 | Cyclin-like |
| View | Download | 0.385 | a.74.1 | Cyclin-like |
| View | Download | 0.337 | a.74.1 | Cyclin-like |
| View | Download | 0.273 | a.74.1 | Cyclin-like |
