YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|15193288
Organism:	Plasmodium falciparum
Length:	171 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15193288.

Description	E-value	Query Range	Subject Range
gi\|76874620, gi\|... - gi\|77359709\|ref\|YP_339284.1\| peroxiredoxin/glutaredoxin protein [Pseudoalteromonas haloplanktis TAC1...	154.0	[0..1]	[161..96]
gi\|255744397\|ref... - peroxiredoxin family protein/glutaredoxin [Vibrio cholera CIRS 101] gi\|75827887 - gi\|75827887\|ref\|ZP_00757322.1\| COG0678: Peroxiredoxin [Vibrio cholerae O395] tr\|A0A085R3Z6\|A0... - Hybrid peroxiredoxin hyPrx5 OS=Vibrio cholerae GN=DN30_1754 PE=4 SV=1 gi\|75830057, gi\|... - gi\|75830057\|ref\|ZP_00759342.1\| COG0678: Peroxiredoxin [Vibrio cholerae MO10], gi\|116190632\|ref\|ZP_01... gi\|116219574, gi... - gi\|75818991\|ref\|ZP_00749098.1\| COG0678: Peroxiredoxin [Vibrio cholerae V51], gi\|116219574\|ref\|ZP_014... gi\|262158493\|ref... - peroxiredoxin family protein/glutaredoxin [Vibrio cholerae INDRE 91/1] gi\|75822900, gi\|... - gi\|75822900\|ref\|ZP_00752452.1\| COG0678: Peroxiredoxin [Vibrio cholerae RC385], gi\|116216129\|ref\|ZP_0... gi\|75816566 - gi\|75816566\|ref\|ZP_00747032.1\| COG0678: Peroxiredoxin [Vibrio cholerae V52] gi\|262170114\|ref... - peroxiredoxin family protein/glutaredoxin [Vibrio cholerae RC27]	152.0	[0..1]	[163..96]
gi\|153213977, gi... - gi\|153213977\|ref\|ZP_01949170.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae 1587], gi... gi\|121630083, gi... - gi\|121727592\|ref\|ZP_01680700.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae V52], gi\|... gi\|254846881, gi... - gi\|254851176\|ref\|ZP_05240526.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae MO10], gi... gi\|229345953, gi... - gi\|229516890\|ref\|ZP_04406336.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae RC9], gi\|... gi\|153224207, gi... - gi\|153224207\|ref\|ZP_01954293.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae MAK 757],... gi\|229369472, gi... - gi\|229606817\|ref\|YP_002877465.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae MJ-1236]... gi\|126510002, gi... - gi\|153819461\|ref\|ZP_01972128.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae NCTC 8457... gi\|194537404, gi... - gi\|254225383\|ref\|ZP_04918994.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae V51], gi\|... gi\|229509765, gi... - gi\|229509765\|ref\|ZP_04399246.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae B33], gi\|... gi\|254285832, gi... - gi\|254285832\|ref\|ZP_04960794.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae AM-19226]... gi\|194536460, gi... - gi\|254222313\|ref\|ZP_04916185.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae RC385], g... gi\|153825079, gi... - gi\|153825079\|ref\|ZP_01977746.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae MZO-2], g... gi\|227119075, gi... - gi\|227119075\|ref\|YP_002820971.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae O395], g... gi\|227082753, gi... - gi\|227082753\|ref\|YP_002811304.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae M66-2], ... gi\|9657228, gi\|1... - gi\|9657228\|gb\|AAF95778.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae O1 biovar El To... gi\|229507311, gi... - gi\|229507311\|ref\|ZP_04396816.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae BX 330286... gi\|11355792 - pir\|\|D82051 peroxiredoxin family protein/glutaredoxin VC2637 [imported] - Vibrio cholerae (strain N1... gi\|121587911, gi... - gi\|121587911\|ref\|ZP_01677666.1\| peroxiredoxin family protein/glutaredoxin [Vibrio cholerae 2740-80],...	152.0	[0..1]	[163..100]
gi\|38488593 - gi\|38488593\|dbj\|BAD02311.1\| peroxiredoxin like protein [Actinobacillus actinomycetemcomitans]	151.0	[0..1]	[163..106]
GLRX3_XENTR - Glutaredoxin-3 OS=Xenopus tropicalis GN=glrx3 PE=2 SV=2	151.0	[0..1]	[169..55]
gi\|114633373 - gi\|114633373\|ref\|XP_508113.2\| PREDICTED: similar to thioredoxin-like protein [Pan troglodytes]	150.0	[0..6]	[169..69]
gi\|145268872, gi... - gi\|145637932\|ref\|ZP_01793574.1\| DNA-binding transcriptional regulator OxyR [Haemophilus influenzae P... gi\|144985841, gi... - gi\|145633472\|ref\|ZP_01789201.1\| hypothetical protein CGSHi3655_05114 [Haemophilus influenzae 3655], ... gi\|42630019 - gi\|42630019\|ref\|ZP_00155564.1\| COG0678: Peroxiredoxin [Haemophilus influenzae R2846]	150.0	[0..1]	[161..95]
gi\|109090971 - gi\|109090971\|ref\|XP_001090479.1\| PREDICTED: thioredoxin-like isoform 2 [Macaca mulatta]	149.0	[0..6]	[169..69]
gi\|145642264, gi... - gi\|145642264\|ref\|ZP_01797829.1\| DNA-binding transcriptional regulator OxyR [Haemophilus influenzae R... gi\|145638519, gi... - gi\|145638519\|ref\|ZP_01794128.1\| hypothetical protein CGSHiII_07391 [Haemophilus influenzae PittII], ... gi\|145642264, gi... - gi\|145642264\|ref\|ZP_01797829.1\| DNA-binding transcriptional regulator OxyR [Haemophilus influenzae R... gi\|144979425, gi... - gi\|145628955\|ref\|ZP_01784755.1\| DNA-binding transcriptional regulator OxyR [Haemophilus influenzae 2... gi\|42630851 - gi\|42630851\|ref\|ZP_00156390.1\| COG0678: Peroxiredoxin [Haemophilus influenzae R2866] gi\|68057371, gi\|... - gi\|68249172\|ref\|YP_248284.1\| peroxiredoxin/glutaredoxin [Haemophilus influenzae 86-028NP], gi\|680573...	149.0	[0..1]	[161..95]

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Predicted Domain #1

Region A:
Residues: [1-64]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMKNKYGVF FSLSKNAIIN SNRQLFPFKK VSKINFSNSA DDKNNGVIPE QRTQYSGTNE  60
   61 YKDF

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	5.154902
Match:	2diyA
Description:	No description for 2diyA was found.

Predicted Domain #2

Region A:
Residues: [65-171]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKTEVYQTLK IKIKELLEQE KIVLFMKGTP EKPLCGFSAN VVNILNSMNV KDYVYIDVMK  60
   61 NNNLREAIKI YSNWPYIPNL YVNNNFIGGY DIISDLYNRG ELEKIIK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	33.0
Match:	1ykaA
Description:	Solution structure of Grx4, a monothiol glutaredoxin from E. coli.
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits