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View Structure Prediction Details

Protein: COPZ2_ARATH
Organism: Arabidopsis thaliana
Length: 179 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for COPZ2_ARATH.

Description E-value Query
Range
Subject
Range
gi|49646635 - gi|49646635|emb|CAG83019.1| YALI0B11682p [Yarrowia lipolytica]
gi|50546599, gi|... - gi|50546599|ref|XP_500769.1| YALI0B11682p [Yarrowia lipolytica], gi|49646635|emb|CAG83019.1| unnamed...
186.0 [0..8] [176..1]

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Predicted Domain #1
Region A:
Residues: [1-179]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPDSCPLVK NILLLDSEGK RVAVKYYSDD WPTNAAKLSF EKYVFSKTSK TNARTEAEIT  60
   61 LLDSNIIVYK FAQDLHFFVT GGENENELIL ASVLQGFFDA VALLLRSNVE KMEALENLDL 120
  121 IFLCLDEMVD QGVVLETDPN VIAGKVAMQS TEASGSLSEQ TLTQALATAR EHLARSLLT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.09691
Match: 2hf6A
Description: No description for 2hf6A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle