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View Structure Prediction Details

Protein: METK3_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 396 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for METK3_ORYSJ.

Description E-value Query
Range
Subject
Range
METK2_TOBAC - S-adenosylmethionine synthase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1
666.0 [0..4] [390..1]

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Predicted Domain #1
Region A:
Residues: [1-396]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEVDTFLFT SESVNEGHPD KLCDQISDAV LDACLAEDPE SKVACETCTK TNMVMVFGEI  60
   61 TTKANVDYEK IVRDTCRGIG FVSNDVGLDA EHCKVLVNIE QQSPDIAQGV HGHFTKRPEE 120
  121 IGAGDQGHMF GYATDETPEL MPLSHVLATK LGARLTEVRK NGACAWLRPD GKTQVTVEYQ 180
  181 NDNGAMVPLR VHTVLISTQH DETVTNDEIA ADLKEHVIKP VIPEQYLDEK TIFHLNPSGR 240
  241 FVIGGPHGDA GLTGRKIIID TYGGWGAHGG GAFSGKDPTK VDRSGAYIAR QAAKSIVANG 300
  301 LARRCIVQVS YAIGVPEPLS VFVDTYGTGK IPDREILRIV TENFDFRPGM IIINLDLMRG 360
  361 GNGRYLKTAA YGHFGREDPD FTWEVVKPLK WEEPSA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1fugA
Description: S-adenosylmethionine synthetase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
methionine adenosyltransferase activity 8.00759843092519 bayes_pls_golite062009
transferase activity 1.78879119839291 bayes_pls_golite062009
binding 1.70779292877479 bayes_pls_golite062009
catalytic activity 1.59111295908728 bayes_pls_golite062009
transferase activity, transferring alkyl or aryl (other than methyl) groups 1.11999094477144 bayes_pls_golite062009
protein binding 0.298204436433395 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle