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View Structure Prediction Details

Protein: ERS1_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 636 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ERS1_ORYSJ.

Description E-value Query
Range
Subject
Range
ETR2_PELHO - Ethylene receptor 2 OS=Pelargonium hortorum GN=ETR2 PE=2 SV=1
561.0 [0..1] [636..1]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGCDCIEPL WPTDELLIKY QYISDFFIAL AYFSIPLELI YFVKKSSFFP YRWVLIQFGA  60
   61 FIVLCGATHL INLWTFTT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [79-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HTKTVAMVMT VAKVSTAVVS CATALMLVHI IPDLLSVKTR ELFLKNKAEQ LDREMGLIRT  60
   61 QEETGRHVRM LTHEIRSTLD RHTILKTTLV ELGGTLGLEE CALWMPSRSG SSLQLSHTLR 120
  121 HQITVGSTVS INLPVVNQVF SSNRAIIIPH TSPLARIRPL AGRYVPPEVA AVRVPLLHLS 180
  181 NFQINDWPEL SAKSYAIMVL MLPSDSARKW HVHELELVEV VADQVAVALS HAAILEES

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.74
Match: 1ykdA
Description: Crystal Structure of the Tandem GAF Domains from a Cyanobacterial Adenylyl Cyclase: Novel Modes of Ligand-Binding and Dimerization
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [317-636]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRARDLLMEQ NVALDLARRE AEMAIRARND FLAVMNHEMR TPMNAIIALS SLLLETELTP  60
   61 EQRLMVETVL KSSNLLATLI NDVLDLSKLE DGSLELEIKA FNLHAVFKEV MSFIKPIAAI 120
  121 KRLSVSVMLA PDLPLCAIGD EKRLMQTILN ISGNAVKFTK EGHITLVASV VKADSLREFR 180
  181 TPDFHPTASD DNFYLKVQIK DTGCGISPQD LPQVFTKFAQ SQPGGNRGYS GSGLGLAICK 240
  241 RFVTLMGGHI WLDSEGTGRG CTVTFVIQLG ICDNTNAYQQ KLIPLVWPSS GDADFVGPVP 300
  301 NAPNEEKGQA SLKSRYQRSI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.221849
Match: 2c2aA
Description: Structure of the entire cytoplasmic portion of a sensor histidine kinase protein
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle