| Protein: | CCS1_ORYSJ |
| Organism: | Oryza sativa Japonica Group |
| Length: | 564 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCS1_ORYSJ.
| Description | E-value | Query Range |
Subject Range |
|
|
455.0 | [0..108] | [546..13] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MPSPTCYLLL NPTASRSHHR PRLPLPAAAP PRRRVHVSCD ARRTGGGGGG GGVKREAIPA 60
61 GTGKAKKQVV FFDAAPPVSQ RGGGGGGEGE GEGEGEGKVA RRKENAALG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [110-215] |
1 11 21 31 41 51
| | | | | |
1 LVRRLTKRTL SLLSNLPLAI SEMFAIAALM ALGTVIDQGE APSYYFEKFP EDNPVFGFIT 60
61 WRWILTPGFD HMFSSPVFLG LLALLAASLM ACTYTTQIPI VKVARR
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [216-435] |
1 11 21 31 41 51
| | | | | |
1 WSFMHSAGSI RKQEFAESLP RASIQDLGVI LMGYGYEVFT KGPSLYAFKG LAGRFAPIGV 60
61 HIAMIFIMAG ATLSATGSFK GSVDVPQGLN FVIGDVMKPK GVLSFVPDVF NTEVHVNRFY 120
121 MEYYDSGEVS QFYSDLSLFD LDGKEVMRKT IKVNDPLRYG GVTIYQTDWG FSALQVKKNG 180
181 EGPFNLAMAP LKLNGDKKLF GTLLPLENSG SSNVKGISML
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [436-564] |
1 11 21 31 41 51
| | | | | |
1 ARDLQSIVLY DQEGKFVGVR RPSSKLPIEI DGNEIVIEDA IGSTGLDLKT DPGIPIVYAG 60
61 FGALMLTTCI SYLSHSQIWA LQDGSTVVIG GKTNRAKLEF SEEMNRLLDK VPELISVNEK 120
121 KIDSKQSAT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
