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View Structure Prediction Details

Protein: GDL20_ARATH
Organism: Arabidopsis thaliana
Length: 372 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GDL20_ARATH.

Description E-value Query
Range
Subject
Range
gi|25336303, gi|... - gi|4587543|gb|AAD25774.1|AC006577_10 Belongs to the PF|00657 Lipase/Acylhydrolase with GDSL-motif fa...
336.0 [0..1] [372..1]

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Predicted Domain #1
Region A:
Residues: [1-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MECSSVSVLG ILLVFPLLHN LVTISGQNLP AVGLFTFGDS NFDAGNKKFL TSAPLPQNFW  60
   61 PYGKSRDDPK GKFSDGKIVP DFIAKFMGIP HDLPPALKPG TDVSRGASFA VGSASILGSP 120
  121 KDSLALNQQV RKFNQMISNW KVDYIQKSVF MISIGMEDYY NFTKNNPNAE VSAQQAFVTS 180
  181 VTNRFKSDIN LLYSSGASKF VVHLLAPLGC LPIARQEFKT GNNCYEKLND LAKQHNAKIG 240
  241 PILNEMAETK PDFQFTVFDF YNVILRRTQR NMNYRFSVTN ISCCGVGTHY AYGCGLPNVH 300
  301 SKLCEYQRSY LYFDARHNTE KAQEAFAHLI FGADPNVIQP MNVRELMVYP VNEPMREFWE 360
  361 DPMDEKLSLV QY

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.12
Match: 1escA
Description: THE MOLECULAR MECHANISM OF ENANTIORECOGNITION BY ESTERASES
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.471286748048633 bayes_pls_golite062009
catalytic activity 0.319044203629006 bayes_pls_golite062009
protein binding 0.0277911089352154 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle