YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: TOM2A_ARATH
Organism: Arabidopsis thaliana
Length: 280 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TOM2A_ARATH.

Description E-value Query
Range
Subject
Range
gi|92896105 - gi|92896105|gb|ABE93060.1| CD9/CD37/CD63 antigen [Medicago truncatula]
261.0 [0..3] [280..4]

Back

Predicted Domain #1
Region A:
Residues: [1-190]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACRGCLECL LKLLNFLLAV AGLGMIGYGI YLFVEYKRVT DNSVTFDLTN GDQSYVSFGR  60
   61 PILMAVSLSS NIFDNLPKAW FIYLFIGIGV ALFVISCCGC VGTCSRSVCC LSCYSLLLIL 120
  121 LILVELGFAA FIFFDNSWRD ELPSDRTGNF DTIYNFLREN WKIVRWVALG AVVFEALLFL 180
  181 LALMVRAANT 

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 4.920819
Match: PF00335.11
Description: No description for PF00335.11 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [191-280]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAEYDSDDEY LAPRQQIRQP FINRQAAPVT GVPVAPTLDQ RPSRSDPWSA RMREKYGLDT  60
   61 SEFTYNPSES HRFQQMPAQP NEEKGRCTIM 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle