| Protein: | HCAR_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 462 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for HCAR_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
418.0 | [0..44] | [454..7] |
|
|
416.0 | [0..43] | [457..6] |
|
|
415.0 | [0..43] | [452..6] |
|
|
412.0 | [0..40] | [454..9] |
|
|
412.0 | [0..43] | [452..6] |
|
|
409.0 | [0..43] | [452..6] |
|
|
409.0 | [0..43] | [453..10] |
|
|
407.0 | [0..39] | [452..1] |
|
|
406.0 | [0..39] | [452..1] |
|
|
401.0 | [0..40] | [454..3] |
|
Region A: Residues: [1-186] |
1 11 21 31 41 51
| | | | | |
1 MITVVTSRLS LLPPVFSVVN SSSSRSKDMN LEPKKKVKLR EDWREKSRPI PPGGTYPAKD 60
61 HCSQCGLCDT YYIAHVKEAC AFLGDGMSRI ESLEPVVHGR GRKADSLQDT YFGVHQEQLY 120
121 ARKLKPVEGA QWTGIVTTIA IEMLKSNMVE AVVCVQSDPE DRLSPRPVLA RTPEEVLAAR 180
181 GVKPTL
|
| Detection Method: |  |
| Confidence: | 10.221849 |
| Match: | 1b0pA |
| Description: | Pyruvate-ferredoxin oxidoreductase, PFOR, domain I; Pyruvate-ferredoxin oxidoreductase, PFOR, domains VI; Pyruvate-ferredoxin oxidoreductase, PFOR, domain II; Pyruvate-ferredoxin oxidoreductase, PFOR, domain III; Pyruvate-ferredoxin oxidoreductase, PFOR, domain V |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [187-381] |
1 11 21 31 41 51
| | | | | |
1 SPNLNTLELI EASGVKRLLF CGVGCQVQAL RSVEQHLNLE KLYVLGTNCV DNGTRDGLDK 60
61 FLKAASKEPE TVLHYEFMQD YKVQLKHLDG HIEEVPYFSL PANDLVDVIA PSCYSCFDYT 120
121 NALADLVIGY MGVPKYSGLN MTDHPQYITV RNERGKEMLS LVENLLEITP TISSGDRRPF 180
181 VTETVKADDA AKFGQ
|
| Detection Method: | |
| Confidence: | 61.49485 |
| Match: | PF04432.4 |
| Description: | No description for PF04432.4 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [382-462] |
1 11 21 31 41 51
| | | | | |
1 GPAQPAPLFV GNIIAFILNL VGPKGLEFAR YSLDYHTIRN YLYVNRKWGK QRANTHMPSY 60
61 AKKIVEMYNK NGQIDKMLSK K
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.942 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.912 | a.13.1 | alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 |
| View | Download | 0.876 | a.16.1 | S15/NS1 RNA-binding domain |
| View | Download | 0.866 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
| View | Download | 0.857 | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.849 | a.8.11 | Description not found. |
| View | Download | 0.773 | a.60.6 | DNA polymerase beta, N-terminal domain-like |
