| Protein: | TF3A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 412 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TF3A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
596.0 | [0..5] | [410..2477] |
|
Region A: Residues: [1-180] |
1 11 21 31 41 51
| | | | | |
1 MAEEAKVDVK TSAKKDIRNY LCQYCGISRS KNYLITKHIQ SHHQMELEEE RDDEACEVDE 60
61 ESSSNHTCQE CGAEFKKPAH LKQHMQSHSL ERSFTCYVDD CAASYRRKDH LNRHLLTHKG 120
121 KLFKCPKENC KSEFSVQGNV GRHVKKYHSN DNRDKDNTGL GDGDKDNTCK GDDDKEKSGS 180
181
|
| Detection Method: |  |
| Confidence: | 20.045757 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.389311899496243 | bayes_pls_golite062009 |
| nucleic acid binding | 0.0785802832890668 | bayes_pls_golite062009 |
|
Region A: Residues: [181-412] |
1 11 21 31 41 51
| | | | | |
1 GGCEKENEGN GGSGKDNNGN GDSQPAECST GQKQVVCKEI GCGKAFKYPS QLQKHQDSHV 60
61 KLDSVEAFCS EPGCMKYFTN EECLKSHIRS CHQHINCEIC GSKHLKKNIK RHLRTHDEDS 120
121 SPGEIKCEVE GCSSTFSKAS NLQKHMKAVH DDIRPFVCGF PGCGMRFAYK HVRNKHENSG 180
181 YHVYTCGDFV ETDEDFTSRP RGGLKRKQVT AEMLVRKRVM PPRFDAEEHE TC
|
| Detection Method: | |
| Confidence: | 53.69897 |
| Match: | 2i13A |
| Description: | No description for 2i13A was found. |
