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View Structure Prediction Details

Protein: gi|20260268, gi|...
Organism: Arabidopsis thaliana
Length: 193 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|20260268, gi|....

Description E-value Query
Range
Subject
Range
gi|25372996, gi|... - gi|6056416|gb|AAF02880.1|AC009525_14 Unknown protein [Arabidopsis thaliana], pir||A86159 hypothetica...
163.0 [0..1] [142..1]

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Predicted Domain #1
Region A:
Residues: [1-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARSRRKYRN SRAKVRVALP KKNPNIFKPA FNFPPKLRAL MGDDVPEWDD QASVIQNYKS  60
   61 FGVISNPNLL GIRARTDHMI QDDSLNVPPP VEPPTDDPIA KEFEPIDSGS ELEEDDLKTA 120
  121 LGKQRKDGKS APLQPLTTMQ RTHIRRLVEK HGDDIEGMYR DRKLNSMQHS VATLRKLCTR 180
  181 YQIYKDKNPI LVS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 62.481486
Match: PF09420.1
Description: No description for PF09420.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle