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View Structure Prediction Details

Protein: MPK17_ARATH
Organism: Arabidopsis thaliana
Length: 486 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MPK17_ARATH.

Description E-value Query
Range
Subject
Range
gi|110180218 - gi|110180218|gb|ABG54344.1| double HA-tagged mitogen activated protein kinase 17 [synthetic construc...
426.0 [0..1] [486..1]

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Predicted Domain #1
Region A:
Residues: [1-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEKEFFTEY GEASQYQIQE VVGKGSYGVV ASAECPHTGG KVAIKKMTNV FEHVSDAIRI  60
   61 LREIKLLRLL RHPDIVEIKH IMLPPCRKEF KDIYVVFELM ESDLHHVLKV NDDLTPQHHQ 120
  121 FFLYQLLRGL KFMHSAHVFH RDLKPKNILA NADCKIKICD LGLARVSFTD SPSAVFWTDY 180
  181 VATRWYRAPE LCGSFYSNYT PAIDMWSVGC IFAEMLTGKP LFPGKNVVHQ LELVTDLLGT 240
  241 PSPITLSRIR NEKARKYLGN MRRKDPVPFT HKFPNIDPVA LKLLQRLIAF DPKDRPSAEE 300
  301 ALADPYFQGL ANVDYEPSRQ PISKLEFEFE RRKLTRDDVR ELMYREILEY HPQMLQEYLQ 360
  361 GEENINSHFL Y

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 91.39794
Match: 1tvoA
Description: The structure of ERK2 in complex with a small molecule inhibitor
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [372-486]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PSGVDQFKQE FARLEEHNDD EEEHNSPPHQ RKYTSLPRER VCSSEDEGSD SVHAQSSSAS  60
   61 VVFTPPQTPN TATGLSSQKA SQVDKAATPV KRSACLMRSD SICASRCVGV SSAVS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle