| Protein: | MSL9_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 742 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MSL9_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
455.0 | [0..1] | [738..1] |
|
Region A: Residues: [1-174] |
1 11 21 31 41 51
| | | | | |
1 MAERRVSNGE EVVINVSDKE DSKDPRASPS FNPLASPDSD AGIEKSKPVP PISIPTPEIY 60
61 KFSGSVHKPP KIPSPEGLVR RKSLSRSIYS KPKSRFGEQQ SFRYDSTREE NGGRSLREQF 120
121 GAGSFARGSF DRASPNNKSN RSVASAALSK VAEEEPDENE EIYKKVKLHR VKRS
|
| Detection Method: |  |
| Confidence: | 3.69897 |
| Match: | 1oqyA |
| Description: | Structure of the DNA repair protein hHR23a |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [175-455] |
1 11 21 31 41 51
| | | | | |
1 GMKPLAFLEL VVFMAILGAL IVSLTIDVVN KHTIWGLEFW KWCVLVMVTL SGMLVTNWFM 60
61 HFVVFIIEKN YLLRKKVLYF VHGLKKNVQV FIWFSLVLIA WICLFDGDVK RTRKTKRFLD 120
121 FITWTIVSLL VGSILFLVKT FALKVLASKF NVRNFFERIQ ESVFHQYVLQ TLSGPPLIEE 180
181 AENVGRVPST GHLSFTRTKD GKVKDKKVID MGKVHRMKQE KVSAWTMRVL IEAVGTSGIS 240
241 TISSTLDEVN NKKERTDKEI TNEMEAVAAA YDVFNNVAKP N
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [456-742] |
1 11 21 31 41 51
| | | | | |
1 HNYIEEDDLL RFMIKEEVDL VLPLIEDADT GKITRKTFTE WVVNVYTSRK TIGHSLNDTK 60
61 TAVKQLDKLI TGILTVITFI VWMVLLDIAS TKLLLVFSSQ FLGLAFMIGS TCKNIFESFM 120
121 FVFVMHPYDV GDRCVVDGVM LLVEEIDLLT TVFLKIDNEK VFYPNSVLIS KPISNFYRSP 180
181 DMGDYVDFGI AFSTPAEKIG CLKGKIGEYL VANSQHWYPE AQVMVRAIEN MNKLVLNILV 240
241 QHTINFQVYV EKSLRRTALI IAIKRILEDL EIDYTLLPQD VNLTGHK
|
| Detection Method: | |
| Confidence: | 65.0 |
| Match: | 2oauA |
| Description: | No description for 2oauA was found. |
