| Protein: | CAAT1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 594 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAAT1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
396.0 | [0..30] | [568..939] |
|
Region A: Residues: [1-480] |
1 11 21 31 41 51
| | | | | |
1 MASGGGDDGL RRRGCSCTKD DFLPEESFQS MGNYLKALKE TPSRFMDRIM TRSLDSDEIN 60
61 EMKARSGHEM KKTLTWWDLM WFGIGAVIGS GIFVLTGLEA RNHSGPAVVL SYVVSGVSAM 120
121 LSVFCYTEFA VEIPVAGGSF AYLRVELGDF MAFIAAGNII LEYVVGGAAV ARSWTSYFAT 180
181 LLNHKPEDFR IIVHKLGEDY SHLDPIAVGV CAIICVLAVV GTKGSSRFNY IASIIHMVVI 240
241 LFVIIAGFTK ADVKNYSDFT PYGVRGVFKS AAVLFFAYIG FDAVSTMAEE TKNPGRDIPI 300
301 GLVGSMVVTT VCYCLMAVTL CLMQPYQQID PDAPFSVAFS AVGWDWAKYI VAFGALKGMT 360
361 TVLLVGAIGQ ARYMTHIARA HMMPPWLAQV NAKTGTPINA TVVMLAATAL IAFFTKLKIL 420
421 ADLLSVSTLF IFMFVAVALL VRRYYVTGET STRDRNKFLV FLGLILASST ATAVYWALEE 480
481
|
| Detection Method: |  |
| Confidence: | 1.36 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [481-594] |
1 11 21 31 41 51
| | | | | |
1 EGWIGYCITV PIWFLSTVAM KFLVPQARAP KIWGVPLVPW LPSASIAINI FLLGSIDTKS 60
61 FVRFAIWTGI LLIYYVLFGL HATYDTAKAT LKEKQALQKA EEGGVVADNS CSAT
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
