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View Structure Prediction Details

Protein: DIOX2_ARATH
Organism: Arabidopsis thaliana
Length: 332 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DIOX2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21554579 - gi|21554579|gb|AAM63621.1| flavonol synthase-like protein [Arabidopsis thaliana]
344.0 [0..1] [332..1]

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Predicted Domain #1
Region A:
Residues: [1-332]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATDFKSLPV IDISRLLLKC DDPDMAEDVG VAEVVQQLDK ACRDAGFFYV IGHGISEDVI  60
   61 NKVREITREF FKLPYEEKLK IKMTPAAGYR GYQRIGENVT KGIPDIHEAI DCYREIKQGK 120
  121 YGDIGKVMEG PNQWPENPQE FKELMEEYIK LCTDLSRKIL RGISLALAGS PYEFEGKMAG 180
  181 DPFWVMRLIG YPGAEFTNGQ PENDIGCGAH TDYGLLTLVN QDDDKTALQV RNLGGEWISA 240
  241 IPIPGSFVCN IGDMLKILSN GVYESTLHRV INNSPQYRVC VAFFYETNFD AVVEPLDICK 300
  301 QKYPGGRGGC QVFKRAVYGE HLVSKVQTNF AM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 82.69897
Match: 1w9yA
Description: The structure of ACC oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 2.13037944896112 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors 1.96457406152694 bayes_pls_golite062009
binding 1.78258647804494 bayes_pls_golite062009
catalytic activity 0.921320409505 bayes_pls_golite062009
nucleic acid binding 0.778311364997835 bayes_pls_golite062009
DNA binding 0.705906158188305 bayes_pls_golite062009
protein binding 0.200706152890822 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle