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View Structure Prediction Details

Protein: gi|110735809, gi...
Organism: Arabidopsis thaliana
Length: 553 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|110735809, gi....

Description E-value Query
Range
Subject
Range
gi|47224457 - gi|47224457|emb|CAG08707.1| unnamed protein product [Tetraodon nigroviridis]
673.0 [0..16] [545..27]

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Predicted Domain #1
Region A:
Residues: [1-553]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSSRRLLLP LGASLTRGRF SSDQIRNGFL RNFRGFATVT SSEPALANLE AKYAVALPEC  60
   61 STVEDEITKI RHEFELAKQR FLNIPEAINS MPKMNPQGIY VNKNLRLDNI QVYGFDYDYT 120
  121 LAHYSSHLQS LIYDLAKKHM VNEFRYPDVC TQFEYDPTFP IRGLYYDKLK GCLMKLDFFG 180
  181 SIEPDGCYFG RRKLSRKEIE SMYGTRHIGR DQARGLVGLM DFFCFSEACL IADMVQYFVD 240
  241 AKLEFDASNI YNDVNRAIQH VHRSGLVHRG ILADPNRYLL KNGQLLRFLR MLKDKGKKLF 300
  301 LLTNSPYNFV DGGMRFLMEE SFGFGDSWRE LFDVVIAKAN KPEFYTSEHP FRCYDSERDN 360
  361 LAFTKVDAFD PKKVYYHGCL KSFLEITKWH GPEVIYFGDH LFSDLRGPSK AGWRTAAIIH 420
  421 ELEREIQIQN DDSYRFEQAK FHIIQELLGR FHATVSNNQR SEACQSLLDE LNNARQRARD 480
  481 TMKQMFNRSF GATFVTDTGQ ESAFSYHIHQ YADVYTSKPE NFLLYRPEAW LHVPYDIKIM 540
  541 PHHVKVASTL FKT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 179.0
Match: 2j2cA
Description: No description for 2j2cA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle