| Protein: | SLK2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 816 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SLK2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
232.0 | [0..61] | [816..1] |
|
|
200.0 | [0..2] | [815..13] |
|
|
199.0 | [0..29] | [781..194] |
|
|
186.0 | [0..13] | [815..236] |
|
|
183.0 | [0..13] | [815..236] |
|
Region A: Residues: [1-107] |
1 11 21 31 41 51
| | | | | |
1 MASSTSGIFF QGDDESQSFI NSHLTSSYGN SSNSAPGCGG PTGGYHNLSM VSGDMHNPVM 60
61 MSVSTPGPSA GASSLVTDAN SGLSGGGPHL QRSASINNES YMRLPAS
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [108-306] |
1 11 21 31 41 51
| | | | | |
1 PMSFSSNNIS ISGSSVVDGS TVVQRHDPSV QLGGSSATSL PTSQTNQIPL SMARRASESF 60
61 FQDPNNLTQA RKKPRLDSKQ DDALQQQILR QWLQRQDILQ QQQQQQQQGQ NPQFQILLQQ 120
121 QKLRQQQQYL QSLPPLQRVQ LQQQQQVQQQ QQLQQQHQQQ QQQLQQQGMQ MQLTGGPRPY 180
181 ENSVCARRLM QYLYHQRQR
|
| Detection Method: | |
| Confidence: | 4.69897 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [307-519] |
1 11 21 31 41 51
| | | | | |
1 PSESSIVYWR KFVTEYFSPR AKKRWCLSHY DNVGHSALGV SPQAATDEWQ CDLCGSKSGR 60
61 GFEATFDVLP RLNEIKFASG VLDELLYLGV PSERRYGSGI MVLEYGKAVQ ESVYEHIRVV 120
121 REGHLRIIFS QELKILSWEF CTRRHEELLP RRLVAPQVNQ LLQVAEKCQS TIDQSGSDGI 180
181 HQQDLQANSN MVMAAGRQLA KSLESHSLND LGF
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [520-693] |
1 11 21 31 41 51
| | | | | |
1 SKRYVRCLQI SEVVSSMKDM IDFCRDQKVG PIEALKSYPY RMKAGKPQMQ EMEQLAAARG 60
61 LPPDRNSLNK LMALRNSGIN IPMNNMSGQG SLPGSAQAAA FALTNYQSML MKQNHLNSDL 120
121 NNTTIQQEPS RNRSASPSYQ GTSPLLPGFV HSPSISGVSS HLSPQRQMPS SSYN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [694-816] |
1 11 21 31 41 51
| | | | | |
1 GSTQQYHQQP PSCSSGNQTL EQQMIHQIWQ QMANSNGGSG QQQQSLSGQN MMNCNTNMGR 60
61 NRTDYVPAAA ETPSTSNRFR GIKGLDQSQN LEGIISNTSL NFGNNGVFSN EVDESMGGYS 120
121 WKS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
