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View Structure Prediction Details

Protein: NBP35_ARATH
Organism: Arabidopsis thaliana
Length: 350 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NBP35_ARATH.

Description E-value Query
Range
Subject
Range
gi|13430794 - gi|13430794|gb|AAK26019.1|AF360309_1 putative nucleotide-binding protein [Arabidopsis thaliana]
313.0 [0..1] [350..1]

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Predicted Domain #1
Region A:
Residues: [1-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENGDIPEDA NEHCPGPQSE SAGKSDSCAG CPNQEACATA PKGPDPDLVA IAERMSTVKH  60
   61 KILVLSGKGG VGKSTFSAQL SFALAGMDHQ VGLMDIDICG PSIPKMLGLE GQEIHQSNLG 120
  121 WSPVYVEDNL GVMSIGFMLP NSDEAVIWRG PRKNGLIKQF LKDVYWGEID YLVVDAPPGT 180
  181 SDEHISIVQY LLPTGIDGAI IVTTPQEVSL IDVRKEVSFC KKVGVPVLGV VENMSGLSQP 240
  241 LKDVKFMKLA TETGSSINVT EDVIACLRKN APELLDIVAC SEVFDSSGGG AERMCREMGV 300
  301 PFLGKVPMDP QLCKAAEQGK SCFEDNKCLI SAPALKSIIQ KVVPSTVMTE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.39794
Match: 2ph1A
Description: No description for 2ph1A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle