| Protein: | gi|23297040, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 655 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23297040, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
733.0 | [0..1] | [655..1] |
|
|
667.0 | [0..14] | [645..51] |
|
|
665.0 | [0..15] | [650..7] |
|
|
525.0 | [0..49] | [611..2] |
|
Region A: Residues: [1-110] |
1 11 21 31 41 51
| | | | | |
1 MANSPAAPAP TTTTGGDSRR RLSASIEAIC KRRFRRNSKG GGRSDMVKPF NIINFSTQDK 60
61 NSSCCCFTKF QIVKLLLFIL LSATLFTIIY SPEAYHHSLS HSSSRRQDPR
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.524 | a.8.11 | Description not found. |
| View | Download | 0.491 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.294 | a.143.1 | RNA polymerase omega subunit |
| View | Download | 0.292 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.292 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.290 | a.25.1 | Ferritin-like |
| View | Download | 0.288 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.286 | a.74.1 | Cyclin-like |
| View | Download | 0.255 | a.4.9 | Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 |
| View | Download | 0.245 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
|
Region A: Residues: [111-315] |
1 11 21 31 41 51
| | | | | |
1 YFSDLDINWD DVTKTLENIE EGRTIGVLNF DSNEIQRWRE VSKSKDNGDE EKVVVLNLDY 60
61 ADKNVTWDAL YPEWIDEEQE TEVPVCPNIP NIKVPTRRLD LIVVKLPCRK EGNWSRDVGR 120
121 LHLQLAAATV AASAKGFFRG HVFFVSRCFP IPNLFRCKDL VSRRGDVWLY KPNLDTLRDK 180
181 LQLPVGSCEL SLPLGIQDRP SLGNP
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [316-655] |
1 11 21 31 41 51
| | | | | |
1 KREAYATILH SAHVYVCGAI AAAQSIRQSG STRDLVILVD DNISGYHRSG LEAAGWQIRT 60
61 IQRIRNPKAE KDAYNEWNYS KFRLWQLTDY DKIIFIDADL LILRNIDFLF SMPEISATGN 120
121 NGTLFNSGVM VIEPCNCTFQ LLMEHINEIE SYNGGDQGYL NEVFTWWHRI PKHMNFLKHF 180
181 WIGDEDDAKR KKTELFGAEP PVLYVLHYLG MKPWLCYRDY DCNFNSDIFV EFATDIAHRK 240
241 WWMVHDAMPQ ELHQFCYLRS KQKAQLEYDR RQAEAANYAD GHWKIRVKDP RFKICIDKLC 300
301 NWKSMLRHWG ESNWTDYESF VPTPPAITVD RRSSLPGHNL
|
| Detection Method: | |
| Confidence: | 57.522879 |
| Match: | 1zcvA |
| Description: | apo form of a mutant of glycogenin in which Asp159 is replaced by Asn |
Matching Structure (courtesy of the PDB): |
|
