| Protein: | CASP_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 689 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CASP_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
205.0 | [0..3] | [644..1416] |
|
Region A: Residues: [1-242] |
1 11 21 31 41 51
| | | | | |
1 MEVSQDGSER DKTPPPSSSS SSSSPIPVVT NFWKEFDLEK EKSLLDEQGL RIAENQENSQ 60
61 KNRRKLAEST RDFKKASPEN KLSMFNSLLK GYQEEVDNIT KRAKFGENAF LNIYQKLYEA 120
121 PDPFPALASI AEQDRKLSEV ESENRKMKVE LEEFRTEATH LKNQQATIRR LEERNRQLEQ 180
181 QMEEKIKEVV EIKQRNLAEE NQKTMELLKD REQALQDQLR QAKDSVSTMQ KLHELAQNQL 240
241 FE
|
| Detection Method: |  |
| Confidence: | 1.82 |
| Match: | 2i1jA |
| Description: | No description for 2i1jA was found. |
|
Region A: Residues: [243-537] |
1 11 21 31 41 51
| | | | | |
1 LRAQSDEETA GKQSEVSLLM DEVERAQTRL LTLEREKGHL RSQLQTANED TDNKKSDNID 60
61 SNSMLENSLT AKEKIISELN MEIHNVETAL ANERESHVAE IKKLNSLLNK KDTIIEEMKK 120
121 ELQERPSAKL VDDLRKKVKI LQAVGYNSIE AEDWDAATTG EEMSKMESLL LDKNRKMEHE 180
181 VTQLKVQLSE KASLLEKAEA KGEELTAKVN EQQRLIQKLE DDILKGYGSK ERKGALFDEW 240
241 EFSEAGVAEQ SEPMDQKHVP SEQDQSSMLK VICSQRDRFR ARLRETEEEI RRLKE
|
| Detection Method: | |
| Confidence: | 15.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [538-689] |
1 11 21 31 41 51
| | | | | |
1 KIGFLTDELE KTKADNVKLY GKIRYVQDYN HDKVVSRGSK KYVEDLESGF SSDVESKYKK 60
61 IYEDDINPFA AFSKKEREQR IKDLGIRDRI TLSSGRFLLG NKYARTFAFF YTIGLHVLVF 120
121 TCLYRMSAYS YLSHGAEETL MTEATTNLPH GL
|
| Detection Method: | |
| Confidence: | 9.0 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
