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View Structure Prediction Details

Protein: gi|23296764, gi|...
Organism: Arabidopsis thaliana
Length: 558 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|23296764, gi|....

Description E-value Query
Range
Subject
Range
GLPK2_THEMA, GLK... - Glycerol kinase 2 OS=Thermotoga maritima GN=glpK2 PE=3 SV=2, (Q9X1E4) Glycerol kinase 2 (EC 2.7.1.30...
GLPK2_THEMA - Glycerol kinase 2 OS=Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=glpK2 ...
537.0 [0..10] [543..2]

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Predicted Domain #1
Region A:
Residues: [1-558]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADLSLPPDS LFLGFDSSTQ SMKATVLDSN LNIIKTELVH FDSDLPQYKT KDGVYRDTTV  60
   61 NGRIVSPTLM WVEAFDLILQ KLSNANFDFA KVIAVSGSGQ QHGSVYWSKG SSEVLRSLDS 120
  121 KRSLKEQLEN AFSVKESPIW MDSSTTLQCK EIENAVGGAM ELSKITGSRA YERFTGPQIR 180
  181 KLFMTQGEVY KSTERISLVS SFMASLLVGD YACIDETDAA GMNLMDIEKR CWSKAALEAT 240
  241 ATGLEEKLGK LAPAYATAGS ISQYFVQRFG FEKNCVVVQW SGDNPNSLAG LTLSTPGDLA 300
  301 ISLGTSDTVF GITKELQPSL EGHVLPNPVD PESYMVMLVY KNASLTREEI RDRCAEGSWD 360
  361 VFNKYLQQTQ PLNNGKLGFY YTENEILPPL PVGSHRYILE NFSGESLEGV KEQEVGEFDP 420
  421 PSEVRALIEG QFLSKRAHTE RFGMPSPPLR IIATGGASAN ENILSLISAI FGCDVYTVQR 480
  481 PDSASLGAAL RAAHGWLCNK KGSFVPISNL YEGKLETTSL NCKLKVKAGD ANIASTYGLL 540
  541 MKKRMEIENK LVEKLGHF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 140.0
Match: 2p3rA
Description: No description for 2p3rA was found.

Predicted functions:

Term Confidence Notes
carbohydrate kinase activity 2.33338276303563 bayes_pls_golite062009
hexokinase activity 1.70516840340504 bayes_pls_golite062009
binding 1.44744777288539 bayes_pls_golite062009
glucokinase activity 0.47468456642723 bayes_pls_golite062009
kinase activity 0.345540463799773 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.324655711623803 bayes_pls_golite062009
catalytic activity 0.296484721581333 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.214617425075414 bayes_pls_golite062009
protein binding 0.213044068887966 bayes_pls_golite062009
nucleic acid binding 0.132883501060045 bayes_pls_golite062009
transferase activity 0.105619024604158 bayes_pls_golite062009
glucose binding 0.0361890405625098 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle