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View Structure Prediction Details

Protein: gi|30687527, gi|...
Organism: Arabidopsis thaliana
Length: 354 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30687527, gi|....

Description E-value Query
Range
Subject
Range
gi|197264413, gi... - gi|197264413|ref|ZP_03164487.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica se...
gi|167994617, gi... - gi|205327551|gb|EDZ14315.1| dTDP-glucose 4,6-dehydratase [Salmonella enterica subsp. enterica serova...
lcl|NC_016856.1_... - [gene=rffG] [protein=dTDP-glucose 4,6-dehydratase] [protein_id=YP_005240184.1] [location=4145370..41...
gi|16422490, gi|... - gi|6960275|gb|AAF33465.1| 89% identity with E. coli dTDP-D-glucose-4,6-dehydratase (RFFG) (SP:P27830...
293.0 [0..11] [354..2]

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Predicted Domain #1
Region A:
Residues: [1-354]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELQGEESKT ATYCVTGASG YIGSWLVKSL LQRGYTVHAT LRDLAKSEYF QSKWKENERL  60
   61 RLFRADLRDD GSFDDAVKGC DGVFHVAASM EFDISSDHVN LESYVQSKVI EPALKGVRNV 120
  121 LSSCLKSKSV KRVVFTSSIS TLTAKDENER MRSFVDETCK AHVDHVLKTQ ASGWIYVLSK 180
  181 LVSEEEAFRY AKERGMDLVS VITTTVSGPF LTPFVPSSVQ VLLSPITGDS KLFAILSAVN 240
  241 KRMGSIALVH IEDICRAHLF LMEQPKAKGQ YICCVDNIDM HELMLHHFSK DYLCKVQKVN 300
  301 EDEEERECMK PIISSKKLRE LGFEYKYGIE EIVDQTIDAS IKIKFPTLNH KLRQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 55.69897
Match: 2c29D
Description: No description for 2c29D was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle