YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|30685465, gi|...
Organism: Arabidopsis thaliana
Length: 425 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30685465, gi|....

Description E-value Query
Range
Subject
Range
gi|186464325, gi... - gi|23128981|ref|ZP_00110817.1| COG2319: FOG: WD40 repeat [Nostoc punctiforme PCC 73102], gi|18668187...
418.0 [0..3] [425..1174]

Back

Predicted Domain #1
Region A:
Residues: [1-425]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEEEAVAEE NGGLKVESGE QKSSWPTMRF DVSPYRTHHF SKQFRTARNP NNFLKGLKWS  60
   61 PDGSCFLASS EDNTLSLFHL PQDGGDSNGY GVPVPEEDSY GASLLVNEGE SVYDFCWYPY 120
  121 MSVSDPLTCV FATSTRDHPI HLWDSTSGEL RCTYRAYDAM DEITAAFSVG FNPDGTKIFA 180
  181 GYNSSIRVFD LHRPGRDFRQ YSTLQKNKEG QAGILSTLAF SPTNSGMLAV GSYGQTTGIY 240
  241 REDNMELLYV LHGQEGGVTH VQFSKDGNYL YTGGRKDPYI LCWDIRKSVE IVYKLYRATE 300
  301 NTNQRVFFDI EPCGRHLGTG GQDGLVHMYD LQTGNWVSGY QAASDTVNAF SFHPYLPMAA 360
  361 TSSGHRRFAI PDDDDGEDKN ELQLKADENC VSLWSFYVED NTYDENNGVA SESHLQNVTE 420
  421 EIVLT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.69897
Match: 2ovpB
Description: No description for 2ovpB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle